Homologs in group_443

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00510 FBDBKF_00510 100.0 Morganella morganii S1 fliZ flagella biosynthesis regulatory protein FliZ
EHELCC_01035 EHELCC_01035 100.0 Morganella morganii S2 fliZ flagella biosynthesis regulatory protein FliZ
NLDBIP_02425 NLDBIP_02425 100.0 Morganella morganii S4 fliZ flagella biosynthesis regulatory protein FliZ
HKOGLL_03105 HKOGLL_03105 100.0 Morganella morganii S5 fliZ flagella biosynthesis regulatory protein FliZ
F4V73_RS06520 F4V73_RS06520 97.1 Morganella psychrotolerans fliZ flagella biosynthesis regulatory protein FliZ
PMI_RS07900 PMI_RS07900 80.5 Proteus mirabilis HI4320 fliZ flagella biosynthesis regulatory protein FliZ

Distribution of the homologs in the orthogroup group_443

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_443

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A210 2.79e-62 193 53 1 163 4 fliZ Protein FliZ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A211 2.79e-62 193 53 1 163 4 fliZ Protein FliZ Salmonella typhi
P52627 3.06e-54 172 49 1 163 2 fliZ Regulator of sigma S factor FliZ Escherichia coli (strain K12)
P52629 1.58e-25 95 69 0 59 4 fliZ Protein FliZ (Fragment) Yersinia enterocolitica

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_03940
Feature type CDS
Gene fliZ
Product flagella biosynthesis regulatory protein FliZ
Location 64244 - 64756 (strand: -1)
Length 513 (nucleotides) / 170 (amino acids)

Contig

Accession ZDB_361
Length 286024 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_443
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02899 Phage integrase, N-terminal SAM-like domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02425 regulator of sigma S factor FliZ Biofilm formation - Escherichia coli
Flagellar assembly		 -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG002318 alternative sigma factor regulatory protein VF0394 Motility

Protein Sequence

MSVSKQKKRPVSRYIKDFKHSQTHCSHCHKTLDRISLVFNGQLINKEAISEMTDMIDDTTWMGLQDKFVALCRFCSEIYCNSATDYFDIMAFKQYLFEETEMSHSTVREYVVRLRRLDELLSSKAFPATTEFSTEIIQAQLSEDLSDSALSNYNIALRKYEQYLDWQGKH

Flanking regions ( +/- flanking 50bp)

TTTATCTTTGATTTATTTTTATTAGACTAGACTACACAAGGCGCCAGAATATGTCTGTTTCAAAACAAAAGAAACGGCCCGTAAGCCGTTACATTAAAGACTTCAAACACAGTCAGACTCACTGCAGTCATTGTCACAAAACCCTCGATCGCATCTCCCTGGTTTTCAACGGTCAGCTGATCAATAAAGAAGCTATTTCTGAAATGACAGATATGATCGATGACACCACCTGGATGGGATTACAGGACAAATTTGTGGCACTCTGCCGTTTCTGCAGCGAGATCTACTGCAACAGTGCAACCGATTATTTCGATATCATGGCATTCAAACAGTATCTGTTTGAAGAAACGGAAATGAGCCACAGTACCGTGCGCGAATATGTTGTCCGTCTGCGCCGTCTCGATGAACTGCTGTCCTCCAAAGCCTTCCCGGCCACCACAGAATTCTCCACTGAAATTATCCAGGCTCAGCTGAGTGAAGATTTATCTGACTCCGCCCTGAGCAACTACAACATCGCACTGCGCAAGTACGAACAGTATCTTGACTGGCAGGGCAAACACTGATTTATCAGTCAGACCACTTTTTATCATTTACTGATAAAACAAAGGGAACT