Homologs in group_443

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00510 FBDBKF_00510 97.1 Morganella morganii S1 fliZ flagella biosynthesis regulatory protein FliZ
EHELCC_01035 EHELCC_01035 97.1 Morganella morganii S2 fliZ flagella biosynthesis regulatory protein FliZ
NLDBIP_02425 NLDBIP_02425 97.1 Morganella morganii S4 fliZ flagella biosynthesis regulatory protein FliZ
LHKJJB_03940 LHKJJB_03940 97.1 Morganella morganii S3 fliZ flagella biosynthesis regulatory protein FliZ
HKOGLL_03105 HKOGLL_03105 97.1 Morganella morganii S5 fliZ flagella biosynthesis regulatory protein FliZ
PMI_RS07900 PMI_RS07900 78.2 Proteus mirabilis HI4320 fliZ flagella biosynthesis regulatory protein FliZ

Distribution of the homologs in the orthogroup group_443

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_443

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A210 3.82e-61 190 53 1 163 4 fliZ Protein FliZ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A211 3.82e-61 190 53 1 163 4 fliZ Protein FliZ Salmonella typhi
P52627 1.16e-53 171 49 1 163 2 fliZ Regulator of sigma S factor FliZ Escherichia coli (strain K12)
P52629 9.16e-25 94 67 0 59 4 fliZ Protein FliZ (Fragment) Yersinia enterocolitica

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06520
Feature type CDS
Gene fliZ
Product flagella biosynthesis regulatory protein FliZ
Location 1361572 - 1362087 (strand: -1)
Length 516 (nucleotides) / 171 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_443
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02899 Phage integrase, N-terminal SAM-like domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02425 regulator of sigma S factor FliZ Biofilm formation - Escherichia coli
Flagellar assembly		 -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG002650 alternative sigma factor regulatory protein VF0394 Motility

Protein Sequence

MSVSKQKKRPVSRYIKDFKHSQTHCSHCQKTLDRISLVFNGQLINKEAISEMTDMIDDTIWMGLQDKFVALCRFCSEIYCNSATDYFDIMAFKQYLFEETEMSHSTVREYVVRLRRLDELLSSKAFPTTTAFSTEIIQAQLSEDLSDSALSNYNIALRKYEQYLHWQGKGH

Flanking regions ( +/- flanking 50bp)

TTTATCTTTGATTTATTTTATTAGACTAGACTACACAAGGCGCCAGAATTATGTCTGTTTCAAAACAAAAGAAACGGCCTGTAAGCCGTTATATTAAAGATTTTAAACATAGCCAGACCCACTGCAGTCACTGCCAGAAAACCCTCGACCGCATTTCACTGGTCTTTAATGGTCAATTGATCAATAAAGAAGCCATTTCTGAAATGACGGATATGATCGATGATACTATCTGGATGGGATTACAGGACAAATTTGTGGCACTGTGCCGTTTTTGCAGCGAAATTTACTGCAACAGTGCGACAGATTACTTCGATATTATGGCATTTAAACAGTATCTGTTTGAAGAGACTGAAATGAGCCACAGCACCGTACGCGAATATGTTGTCCGCTTACGCCGCCTCGACGAACTGCTTTCCTCGAAAGCGTTCCCGACCACCACTGCATTTTCAACTGAAATTATTCAGGCACAGCTGAGTGAAGATTTATCTGACTCCGCACTGAGTAACTACAATATTGCACTGCGCAAGTACGAACAGTATCTGCACTGGCAGGGCAAAGGGCACTGAGTTACAGAGCCTGACTTTTTTTATCTTTAACAGATAGAACAAAGGGGACA