Homologs in group_891

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04655 FBDBKF_04655 100.0 Morganella morganii S1 deoR DNA-binding transcriptional regulator LsrR, DeoR family
EHELCC_05945 EHELCC_05945 100.0 Morganella morganii S2 deoR DNA-binding transcriptional regulator LsrR, DeoR family
NLDBIP_06265 NLDBIP_06265 100.0 Morganella morganii S4 deoR DNA-binding transcriptional regulator LsrR, DeoR family
HKOGLL_06620 HKOGLL_06620 100.0 Morganella morganii S5 deoR DNA-binding transcriptional regulator LsrR, DeoR family
F4V73_RS09105 F4V73_RS09105 88.1 Morganella psychrotolerans - sugar-binding transcriptional regulator
PMI_RS07495 PMI_RS07495 55.2 Proteus mirabilis HI4320 - sugar-binding transcriptional regulator

Distribution of the homologs in the orthogroup group_891

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_891

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39356 9.29e-135 389 59 0 322 3 yjhU Uncharacterized transcriptional regulator YjhU Escherichia coli (strain K12)
P39140 4.35e-44 156 31 6 310 1 deoR Deoxyribonucleoside regulator Bacillus subtilis (strain 168)
A7ZLX0 1.12e-29 118 26 8 334 3 lsrR Transcriptional regulator LsrR Escherichia coli O139:H28 (strain E24377A / ETEC)
B1IRU8 2.2e-29 117 26 8 334 3 lsrR Transcriptional regulator LsrR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A065 2.2e-29 117 26 8 334 3 lsrR Transcriptional regulator LsrR Escherichia coli O9:H4 (strain HS)
Q8XAY6 2.2e-29 117 26 8 334 3 lsrR Transcriptional regulator LsrR Escherichia coli O157:H7
P76141 7.82e-29 116 26 8 334 1 lsrR Transcriptional regulator LsrR Escherichia coli (strain K12)
B1XEA0 7.82e-29 116 26 8 334 3 lsrR Transcriptional regulator LsrR Escherichia coli (strain K12 / DH10B)
B1LFA3 8.06e-29 116 26 8 334 3 lsrR Transcriptional regulator LsrR Escherichia coli (strain SMS-3-5 / SECEC)
Q7N2E0 4.07e-28 114 27 8 315 3 lsrR Transcriptional regulator LsrR Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
P37078 8.59e-28 113 28 8 317 1 sorC Sorbitol operon regulator Klebsiella pneumoniae
A4WER5 3.22e-27 112 26 7 331 3 lsrR Transcriptional regulator LsrR Enterobacter sp. (strain 638)
Q8ZKQ5 6.16e-26 108 26 9 332 1 lsrR Transcriptional regulator LsrR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z2X4 6.22e-26 108 26 9 332 3 lsrR Transcriptional regulator LsrR Salmonella typhi
A9MZF9 6.22e-26 108 26 9 332 3 lsrR Transcriptional regulator LsrR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJE8 6.22e-26 108 26 9 332 3 lsrR Transcriptional regulator LsrR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57HE3 6.75e-26 108 26 10 334 3 lsrR Transcriptional regulator LsrR Salmonella choleraesuis (strain SC-B67)
A6TEB9 7.11e-24 102 24 8 335 3 lsrR Transcriptional regulator LsrR Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q2YIQ4 4.66e-17 83 24 5 310 2 eryD Erythritol catabolism regulatory protein EryD Brucella abortus (strain 2308)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_03145
Feature type CDS
Gene deoR
Product DNA-binding transcriptional regulator LsrR, DeoR family
Location 208013 - 208999 (strand: -1)
Length 987 (nucleotides) / 328 (amino acids)

Contig

Accession ZDB_360
Length 302856 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_891
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04198 Putative sugar-binding domain
PF13384 Homeodomain-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2390 Transcription (K) K DNA-binding transcriptional regulator LsrR, DeoR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05346 deoxyribonucleoside regulator - -

Protein Sequence

MTNSDNRLTGRLMFGNDPVLQAAWLYYQSGLSQTEVADAMGISRVTVVKYLQTARENGVVHISLDMARYSRIDMALSLKKKFNLTNVLVVPDSPVTEAAADSARRRENMAQAAGVYLSQVIEDGDVLGVAWGRTIHHMAKCLTPKVIRNMTVLQMLGSVPSQPDFTTVESSSLIAGKFGGECAYLHVPAIVSSAELADALRREPIIQANFAQLDRCTKALFVAGNVTEENPLIRAGVITAEEMTDFRRKGAVGVICGRFYDQAGEPLDTHTDARILGIRLPQLRNIARRIFIATGEQNIAATRGALRGGYVSDLIVDPLIAAHLLSDK

Flanking regions ( +/- flanking 50bp)

ATTGAACATGCCGATGAGTATGATCTCTGGGGCAGCGTGGTGCGCGAAGCATGACAAACAGTGACAACCGCCTGACCGGACGCCTGATGTTCGGTAATGACCCGGTTCTGCAGGCCGCATGGCTCTATTATCAGTCCGGTCTCAGTCAGACGGAGGTGGCTGATGCGATGGGGATTTCCCGCGTGACCGTGGTGAAATACCTGCAAACGGCCCGGGAAAACGGTGTGGTGCATATCAGCCTGGATATGGCGCGTTACAGCCGCATCGATATGGCGTTGTCACTGAAAAAAAAGTTCAATCTGACCAATGTGCTGGTGGTACCGGACAGCCCGGTTACGGAGGCGGCGGCAGATTCCGCCCGCCGCCGGGAAAACATGGCACAGGCGGCCGGGGTGTATCTCAGTCAGGTGATTGAGGACGGGGATGTGCTCGGCGTGGCCTGGGGACGGACAATTCACCATATGGCGAAGTGTCTGACACCAAAAGTCATCCGCAATATGACGGTATTACAGATGCTCGGTTCCGTGCCGTCGCAGCCGGATTTCACCACGGTGGAATCGTCCTCGCTGATTGCCGGAAAGTTCGGCGGTGAGTGTGCGTATCTGCATGTTCCCGCGATTGTCAGCTCTGCGGAGCTGGCAGATGCACTGCGCCGTGAGCCTATCATTCAGGCAAACTTTGCTCAGCTGGATCGCTGCACCAAAGCACTGTTCGTGGCCGGAAATGTCACGGAAGAGAACCCGCTGATCCGCGCCGGCGTGATCACGGCAGAGGAAATGACTGACTTCCGCCGCAAAGGGGCGGTCGGGGTTATTTGCGGACGTTTTTATGATCAGGCGGGTGAGCCGCTGGATACCCATACGGATGCCCGCATCCTCGGTATCCGGCTGCCGCAGCTGCGCAACATTGCACGGCGGATTTTTATCGCCACCGGTGAACAAAATATCGCCGCCACCCGCGGGGCACTGCGTGGCGGATATGTTTCTGATTTAATTGTTGATCCGCTGATCGCGGCACATTTGCTGTCAGATAAATAAGTGCAAAAACCGCCGGAAGGCGGTTTTTTTACATCAGAGCATTAATATTG