Homologs in group_3320

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11040 FBDBKF_11040 100.0 Morganella morganii S1 ebgC beta-galactosidase subunit beta
EHELCC_05185 EHELCC_05185 100.0 Morganella morganii S2 ebgC beta-galactosidase subunit beta
NLDBIP_05505 NLDBIP_05505 100.0 Morganella morganii S4 ebgC beta-galactosidase subunit beta
HKOGLL_15765 HKOGLL_15765 100.0 Morganella morganii S5 ebgC beta-galactosidase subunit beta

Distribution of the homologs in the orthogroup group_3320

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3320

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AC73 1.65e-54 171 52 0 149 1 ebgC Evolved beta-galactosidase subunit beta Escherichia coli (strain K12)
P0AC74 1.65e-54 171 52 0 149 3 ebgC Evolved beta-galactosidase subunit beta Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_02385
Feature type CDS
Gene ebgC
Product beta-galactosidase subunit beta
Location 48148 - 48597 (strand: 1)
Length 450 (nucleotides) / 149 (amino acids)

Contig

Accession ZDB_360
Length 302856 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3320
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF04074 YhcH/YjgK/YiaL

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2731 Carbohydrate transport and metabolism (G) G Beta-galactosidase, beta subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12112 evolved beta-galactosidase subunit beta Galactose metabolism
Other glycan degradation
Metabolic pathways		 -

Protein Sequence

MILFTDLTDFQRFFRQGKKWQRCIEAINNLPSIHPDVTYSVGDSLIYRLQTKTEPQPDFLGKRRYFQVHYWLEGEENVEYAAKSALTPVNAYSDETDRETLCGKGETLLCKPGNVLVCENHEAYRFTCSGDVRKVVLTVTIEDGYFLNK

Flanking regions ( +/- flanking 50bp)

ACACTGGCAACACTGCATTTTTCAGGCGAAATACACTCAGGAGGCCGGGCATGATCCTGTTTACTGATTTAACGGATTTTCAGCGTTTTTTCCGTCAGGGAAAAAAATGGCAGCGTTGTATTGAGGCCATCAATAACCTGCCGTCCATTCATCCTGATGTGACCTATTCTGTCGGTGATTCACTGATATACCGCCTGCAGACTAAAACAGAGCCACAGCCGGATTTCCTCGGTAAACGCCGTTATTTTCAGGTGCATTACTGGCTGGAGGGTGAGGAAAACGTGGAGTATGCCGCCAAATCCGCCCTGACCCCGGTAAATGCCTACAGTGATGAAACTGACCGCGAAACCCTGTGCGGCAAAGGGGAAACTCTGCTCTGCAAACCCGGCAATGTGCTGGTGTGTGAAAATCACGAGGCATACCGGTTCACCTGCTCAGGCGATGTCCGCAAAGTGGTGCTTACCGTGACCATTGAAGACGGTTATTTCCTGAATAAATAGATCCACGGAGAACGCTATGTCCACATCCGCGCGTAATACCATCGGCAAGT