Homologs in group_3322

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11040 FBDBKF_11040 100.0 Morganella morganii S1 ebgC beta-galactosidase subunit beta
NLDBIP_05505 NLDBIP_05505 100.0 Morganella morganii S4 ebgC beta-galactosidase subunit beta
LHKJJB_02385 LHKJJB_02385 100.0 Morganella morganii S3 ebgC beta-galactosidase subunit beta
HKOGLL_15765 HKOGLL_15765 100.0 Morganella morganii S5 ebgC beta-galactosidase subunit beta

Distribution of the homologs in the orthogroup group_3322

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3322

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AC73 1.65e-54 171 52 0 149 1 ebgC Evolved beta-galactosidase subunit beta Escherichia coli (strain K12)
P0AC74 1.65e-54 171 52 0 149 3 ebgC Evolved beta-galactosidase subunit beta Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_05185
Feature type CDS
Gene ebgC
Product beta-galactosidase subunit beta
Location 29559 - 30008 (strand: 1)
Length 450 (nucleotides) / 149 (amino acids)
In genomic island -

Contig

Accession ZDB_215
Length 284267 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3322
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF04074 YhcH/YjgK/YiaL

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2731 Carbohydrate transport and metabolism (G) G Beta-galactosidase, beta subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12112 evolved beta-galactosidase subunit beta Galactose metabolism
Other glycan degradation
Metabolic pathways		 -

Protein Sequence

MILFTDLTDFQRFFRQGKKWQRCIEAINNLPSIHPDVTYSVGDSLIYRLQTKTEPQPDFLGKRRYFQVHYWLEGEENVEYAAKSALTPVNAYSDETDRETLCGKGETLLCKPGNVLVCENHEAYRFTCSGDVRKVVLTVTIEDGYFLNK

Flanking regions ( +/- flanking 50bp)

ACACTGGCAACACTGCATTTTTCAGGCGAAATACACTCAGGAGGCCGGGCATGATCCTGTTTACTGATTTAACGGATTTTCAGCGTTTTTTCCGTCAGGGAAAAAAATGGCAGCGTTGTATTGAGGCCATCAATAACCTGCCGTCCATTCATCCTGATGTGACCTATTCTGTCGGTGATTCACTGATATACCGCCTGCAGACTAAAACAGAGCCACAGCCGGATTTCCTCGGTAAACGCCGTTATTTTCAGGTGCATTACTGGCTGGAGGGTGAGGAAAACGTGGAGTATGCCGCCAAATCCGCCCTGACCCCGGTAAATGCCTACAGTGATGAAACTGACCGCGAAACCCTGTGCGGCAAAGGGGAAACTCTGCTCTGCAAACCCGGCAATGTGCTGGTGTGTGAAAATCACGAGGCATACCGGTTCACCTGCTCAGGCGATGTCCGCAAAGTGGTGCTTACCGTGACCATTGAAGACGGTTATTTCCTGAATAAATAGATCCACGGAGAACGCTATGTCCACATCCGCGCGTAATACCATCGGCAAGT