Homologs in group_24

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17 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04810 FBDBKF_04810 47.8 Morganella morganii S1 nupC Nucleoside permease NupC
FBDBKF_11115 FBDBKF_11115 100.0 Morganella morganii S1 nupC Nucleoside permease NupC
FBDBKF_17770 FBDBKF_17770 60.9 Morganella morganii S1 nupC Nucleoside permease NupC
EHELCC_05110 EHELCC_05110 100.0 Morganella morganii S2 nupC Nucleoside permease NupC
EHELCC_06100 EHELCC_06100 47.8 Morganella morganii S2 nupC Nucleoside permease NupC
EHELCC_09795 EHELCC_09795 60.9 Morganella morganii S2 nupC Nucleoside permease NupC
NLDBIP_05430 NLDBIP_05430 100.0 Morganella morganii S4 nupC Nucleoside permease NupC
NLDBIP_06420 NLDBIP_06420 47.8 Morganella morganii S4 nupC Nucleoside permease NupC
NLDBIP_10175 NLDBIP_10175 60.9 Morganella morganii S4 nupC Nucleoside permease NupC
LHKJJB_03300 LHKJJB_03300 47.8 Morganella morganii S3 nupC Nucleoside permease NupC
LHKJJB_07580 LHKJJB_07580 60.9 Morganella morganii S3 nupC Nucleoside permease NupC
HKOGLL_06775 HKOGLL_06775 47.8 Morganella morganii S5 nupC Nucleoside permease NupC
HKOGLL_07130 HKOGLL_07130 60.9 Morganella morganii S5 nupC Nucleoside permease NupC
HKOGLL_15690 HKOGLL_15690 100.0 Morganella morganii S5 nupC Nucleoside permease NupC
F4V73_RS08155 F4V73_RS08155 92.2 Morganella psychrotolerans - NupC/NupG family nucleoside CNT transporter
F4V73_RS15195 F4V73_RS15195 60.5 Morganella psychrotolerans - NupC/NupG family nucleoside CNT transporter
PMI_RS11960 PMI_RS11960 60.0 Proteus mirabilis HI4320 - NupC/NupG family nucleoside CNT transporter

Distribution of the homologs in the orthogroup group_24

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_24

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44742 1.79e-148 431 53 4 416 3 HI_0519 Uncharacterized transporter HI_0519 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O25792 1.69e-137 403 51 3 415 3 nupC Nucleoside permease NupC Helicobacter pylori (strain ATCC 700392 / 26695)
O32115 3.28e-133 391 49 4 421 3 yutK Uncharacterized transporter YutK Bacillus subtilis (strain 168)
P33021 5.87e-125 371 47 1 421 1 nupX Putative nucleoside permease NupX Escherichia coli (strain K12)
P33024 3.86e-119 356 46 1 421 1 psuT Putative pseudouridine transporter Escherichia coli (strain K12)
Q9UA35 1.2e-86 280 35 3 423 2 SLC28A3 Solute carrier family 28 member 3 Eptatretus stoutii
Q8VIH3 4.22e-81 266 36 3 416 2 Slc28a3 Solute carrier family 28 member 3 Rattus norvegicus
O43868 6.04e-81 265 35 6 418 1 SLC28A2 Sodium/nucleoside cotransporter 2 Homo sapiens
Q9ERH8 2.07e-80 265 36 3 416 2 Slc28a3 Solute carrier family 28 member 3 Mus musculus
E9PXX9 2.5e-79 260 34 5 422 2 Slc28a1 Sodium/nucleoside cotransporter 1 Mus musculus
Q9HAS3 3.93e-79 261 37 3 366 1 SLC28A3 Solute carrier family 28 member 3 Homo sapiens
Q62674 5.64e-79 259 34 5 422 1 Slc28a1 Sodium/nucleoside cotransporter 1 Rattus norvegicus
O62667 8.62e-77 254 34 5 418 2 SLC28A1 Sodium/nucleoside cotransporter 1 Sus scrofa
O00337 1.38e-76 253 34 5 422 1 SLC28A1 Sodium/nucleoside cotransporter 1 Homo sapiens
O88627 2.08e-76 253 34 6 422 1 Slc28a2 Sodium/nucleoside cotransporter 2 Mus musculus
Q62773 6.14e-76 251 33 6 422 1 Slc28a2 Sodium/nucleoside cotransporter 2 Rattus norvegicus
Q9MZT2 5.29e-74 246 31 5 422 2 SLC28A1 Sodium/nucleoside cotransporter 1 Oryctolagus cuniculus
P39141 1.14e-54 189 29 5 418 2 nupC Nucleoside permease NupC Bacillus subtilis (strain 168)
P0AFF2 2.36e-45 164 28 7 412 1 nupC Nucleoside permease NupC Escherichia coli (strain K12)
P0AFF3 2.36e-45 164 28 7 412 3 nupC Nucleoside permease NupC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P42312 1.15e-30 125 26 10 419 1 nupG Purine nucleoside transport protein NupG Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_02310
Feature type CDS
Gene nupC
Product Nucleoside permease NupC
Location 29025 - 30293 (strand: -1)
Length 1269 (nucleotides) / 422 (amino acids)

Contig

Accession ZDB_360
Length 302856 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_24
Orthogroup size 18
N. genomes 7

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Genomic region

Domains

PF01773 Na+ dependent nucleoside transporter N-terminus
PF07662 Na+ dependent nucleoside transporter C-terminus
PF07670 Nucleoside recognition

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1972 Nucleotide transport and metabolism (F) F Nucleoside permease NupC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03317 concentrative nucleoside transporter, CNT family - -

Protein Sequence

MNTAIGILGIVVLLGIGYLLSENRRAINLRTVVLAFTIELALGGLILYSPAGQHVLFVMAEAVTTVINFNNAGTSFIFGGLVSDKMFEIFGSGGFVIALRVLPIIVFFSALSAVLYYLGIMQILVRWVGGALQRLLKTSRAESMNSAANIFLGVTEAPLLVKPYLGSMTRSELFAVLCGGLASIAGTMLVSYASLGVKMEYLLAASFMAAPGGLLFAKLMIPETQQTADESGAKPVQENRPANIIDAAAEGAINGLNMALAVGAMLLAFVSLVALLNGLLGGVGGWFGLPDLSMELILGYLLSPLAWLMGIPWNEALTSGAIIGQKIVINEFFAYANLAEYLKGNEVVAATGLPMTERTQIILSFALCGFANFGTVAIAIGGIGSLIPNRRKEIATLGMKALVAGVLSNLMAATIAGLFIGG

Flanking regions ( +/- flanking 50bp)

CCGCCGCTGCCGGCGGATTTTTCACTCAGGGTTTTTACCGGATTACACATATGAATACAGCAATCGGCATTCTCGGGATCGTGGTACTGCTGGGAATAGGTTATTTACTGTCTGAAAACCGCCGCGCTATTAATCTGCGCACGGTGGTACTGGCTTTTACCATTGAACTGGCGCTGGGCGGATTAATTCTCTATTCCCCGGCCGGACAGCACGTTTTATTTGTGATGGCAGAGGCAGTCACCACAGTAATCAACTTCAATAATGCCGGAACATCCTTTATTTTCGGCGGTCTGGTCTCTGACAAAATGTTTGAGATTTTCGGCAGCGGCGGGTTTGTTATCGCGCTGAGGGTATTGCCGATTATTGTCTTTTTCTCCGCCTTGTCAGCGGTACTTTATTATCTGGGGATTATGCAGATCCTCGTGCGCTGGGTCGGCGGGGCGTTACAGCGTCTGCTGAAAACCAGCCGTGCGGAATCGATGAACTCAGCGGCCAATATTTTTCTTGGTGTGACAGAAGCGCCTTTGCTGGTTAAACCGTATCTCGGCAGCATGACCCGCTCTGAACTGTTTGCTGTACTGTGCGGCGGGCTGGCATCTATCGCCGGTACTATGCTGGTGAGCTATGCTTCGCTGGGCGTAAAAATGGAATACCTGCTGGCCGCTTCCTTTATGGCGGCACCGGGCGGGTTACTGTTTGCTAAACTGATGATCCCGGAAACACAGCAGACGGCCGATGAATCCGGCGCCAAACCGGTGCAGGAAAACCGCCCGGCGAATATTATTGACGCGGCGGCGGAAGGGGCGATTAACGGCCTGAATATGGCGCTGGCGGTCGGCGCAATGCTGCTGGCGTTTGTCAGCCTGGTGGCGCTGTTAAACGGATTGCTCGGCGGTGTCGGCGGCTGGTTCGGTCTGCCGGATCTGAGCATGGAACTGATCCTCGGCTATCTGCTGTCACCGCTGGCGTGGCTGATGGGTATTCCGTGGAATGAAGCGCTGACATCCGGTGCCATTATCGGGCAGAAAATTGTTATCAACGAATTTTTTGCCTATGCCAACCTGGCGGAATATCTGAAGGGCAATGAAGTCGTGGCTGCCACCGGTCTGCCGATGACTGAGCGGACACAAATCATCCTCTCGTTCGCTCTGTGCGGGTTTGCCAACTTCGGTACCGTGGCAATTGCTATCGGCGGTATCGGCAGTCTGATCCCGAACCGGCGCAAAGAGATTGCCACTCTCGGGATGAAAGCACTGGTCGCCGGGGTGTTATCCAACCTGATGGCGGCCACGATTGCGGGATTGTTTATCGGCGGATAAAGAGTTTGTTATCTGATTTTCTGAAACAATCTGAATGTCAGGTTCATGAT