Homologs in group_3609

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20095 FBDBKF_20095 100.0 Morganella morganii S1 - DUF4113 domain-containing protein
EHELCC_19370 EHELCC_19370 100.0 Morganella morganii S2 - DUF4113 domain-containing protein
NLDBIP_19500 NLDBIP_19500 100.0 Morganella morganii S4 - DUF4113 domain-containing protein
LHKJJB_19450 LHKJJB_19450 100.0 Morganella morganii S3 - DUF4113 domain-containing protein

Distribution of the homologs in the orthogroup group_3609

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3609

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P18642 5.26e-31 115 53 0 94 3 impB Protein ImpB Salmonella typhimurium
P23832 1.94e-30 114 49 0 95 3 samB Protein SamB Salmonella typhimurium
P22494 1.02e-21 90 44 1 96 3 umuC Protein UmuC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P04152 1.21e-20 87 45 1 95 1 umuC Protein UmuC Escherichia coli (strain K12)
P07375 2.5e-18 81 40 1 92 3 mucB Protein MucB Escherichia coli
P14303 2.68e-17 78 40 1 87 3 mucB Protein MucB Salmonella typhimurium

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_19380
Feature type CDS
Gene -
Product DUF4113 domain-containing protein
Location 7751 - 8041 (strand: -1)
Length 291 (nucleotides) / 96 (amino acids)

Contig

Accession ZDB_714
Length 12946 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3609
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF13438 Domain of unknown function (DUF4113)

Protein Sequence

MRALDSIWCDGYRYYKAGIILSDFTDSAITQFDMFATRQPFKNSDELMKTIDTINNSGIGRVWFAGKGSDSGYKMKREMLSPAYTTNFSQLPVVKS

Flanking regions ( +/- flanking 50bp)

TTTCACTCGAGTGCCTCAGCTGCGACACGCGGGACATCATCAATGCCGCCATGAGAGCACTGGATAGTATCTGGTGTGACGGCTACCGGTATTATAAGGCTGGCATCATCCTGTCTGACTTCACGGATTCAGCTATCACGCAGTTCGATATGTTCGCCACCCGGCAGCCATTCAAAAACAGCGATGAGCTGATGAAGACCATCGACACGATCAATAACAGCGGCATAGGTCGCGTGTGGTTTGCTGGTAAAGGCAGCGACAGCGGGTACAAGATGAAGCGCGAAATGTTGTCACCGGCATACACGACAAATTTTAGTCAGTTGCCGGTGGTGAAAAGTTAATGTGTCCATTTAGGCGATGAAGCGCGTTGAGATGGAATACGTTTTTTCAC