Homologs in group_2142

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16095 FBDBKF_16095 100.0 Morganella morganii S1 - DUF560 domain-containing protein
EHELCC_16130 EHELCC_16130 100.0 Morganella morganii S2 - DUF560 domain-containing protein
NLDBIP_17210 NLDBIP_17210 100.0 Morganella morganii S4 - DUF560 domain-containing protein
LHKJJB_17130 LHKJJB_17130 100.0 Morganella morganii S3 - DUF560 domain-containing protein
F4V73_RS17520 F4V73_RS17520 80.9 Morganella psychrotolerans - surface lipoprotein assembly modifier
PMI_RS15440 PMI_RS15440 25.9 Proteus mirabilis HI4320 - surface lipoprotein assembly modifier

Distribution of the homologs in the orthogroup group_2142

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2142

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A0D5YKF0 1.68e-12 72 21 9 429 2 hsmA Hemophilin secretion modulator Acinetobacter baumannii
Q9CKU1 1.44e-10 66 20 10 358 3 PM1515 Surface lipoprotein assembly modifier Pasteurella multocida (strain Pm70)
Q9K165 2e-08 60 21 13 428 1 NMB0313 Surface lipoprotein assembly modifier 1 Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_16710
Feature type CDS
Gene -
Product DUF560 domain-containing protein
Location 7724 - 9076 (strand: -1)
Length 1353 (nucleotides) / 450 (amino acids)

Contig

Accession ZDB_698
Length 62170 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2142
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04575 Surface lipoprotein assembly modifier

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2956 Cell wall/membrane/envelope biogenesis (M) M Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07280 outer membrane protein - -

Protein Sequence

MSSQIKLIYGFILFLLLLVFSLPVSATIQKNNHSENNNTAKNLYLSLKKNNLKAIYHYLSVYQQEHQADPLLIIFSQAKLAYLNQRPGVAIGLYNTILQQKPHFFAAQLELARSYRADRQIGNALLLFRELSQHLPVTSPHYPEITRTITELTRALSWSLLLSAGSHYTDNYYQTPLPKAHCLHYNPDGSCYASLIPQIPHAVLQWRSDWDLRRLTPLSGSHFLTQHYRVSTRYDAANQAANTVTLTAKTGYHYQDRHTLWQLTPLLEQHFSAGRRFSSAYGLQTYLNQQLSPEWSLGGLAALRQHRYQPGLNSHNGTEYQLIPQITWHPHPAATLYLQAETTVHKKNDPYKHYRTAALHTGMTYLWHPSVSQSVHAVYTRKRYHHTHPLHRQAREDLTRQYSTTLALYPPSFAQISPQLSLIHTRNRSSVPWLYSYRQTEIMLRFERLF

Flanking regions ( +/- flanking 50bp)

CATTTCACCAGGAATAGGTTATCTGTTCCTGGTGTTTAACGGATATAAATATGTCGTCGCAGATAAAGTTAATTTACGGATTTATTCTTTTTTTATTATTACTTGTTTTTTCATTACCTGTATCTGCAACTATACAAAAAAACAATCATTCAGAAAATAATAATACTGCAAAAAACTTATATCTTTCACTAAAGAAAAATAACCTCAAAGCGATTTATCATTACCTATCTGTTTATCAGCAGGAACATCAGGCTGATCCGTTACTGATTATCTTCAGCCAGGCAAAACTGGCCTATTTAAACCAGCGCCCCGGGGTTGCTATCGGGTTATATAATACCATTCTGCAACAGAAACCCCATTTCTTTGCCGCACAACTGGAACTGGCCCGCAGCTACCGGGCCGATCGCCAGATCGGGAACGCCTTGCTTTTGTTCCGGGAACTGAGTCAGCACCTGCCGGTGACCTCTCCCCACTATCCGGAGATTACCCGCACCATTACCGAACTCACCCGGGCACTCAGCTGGTCATTACTGCTCAGTGCCGGCAGCCATTACACCGATAATTATTATCAGACCCCGCTTCCGAAAGCACACTGCCTGCACTACAACCCCGATGGTTCCTGTTATGCCAGCCTTATCCCGCAGATCCCCCACGCCGTCTTACAATGGCGCAGCGACTGGGATTTACGCAGGCTGACACCGCTGTCCGGCTCGCATTTTCTGACGCAGCACTACCGGGTATCCACGCGGTATGATGCCGCGAATCAGGCAGCCAATACCGTAACACTGACGGCTAAAACGGGTTATCACTATCAGGATCGCCATACTTTATGGCAACTGACTCCGCTGCTGGAGCAGCATTTTTCCGCCGGGCGCCGTTTTTCCTCCGCTTACGGCTTACAAACATATCTGAATCAGCAACTCAGCCCGGAGTGGTCTCTGGGCGGACTGGCGGCACTGCGACAGCACCGTTATCAGCCCGGTCTGAACTCACATAACGGTACCGAATATCAGCTGATACCGCAGATAACCTGGCATCCGCATCCGGCAGCCACGCTGTATTTACAGGCAGAAACCACCGTTCACAAAAAAAATGATCCCTATAAACATTACCGGACGGCTGCCCTGCATACCGGCATGACCTACCTGTGGCATCCATCTGTGTCCCAATCTGTTCATGCCGTTTACACCCGTAAACGTTATCACCATACACATCCGTTACACCGCCAGGCCAGGGAGGATTTAACCCGACAGTACAGCACAACACTCGCGCTCTACCCGCCGTCATTCGCGCAGATTTCACCTCAGCTTTCACTGATCCACACCCGTAACCGCAGTTCTGTACCGTGGCTTTATAGCTACCGGCAGACTGAAATCATGCTGCGTTTTGAACGGCTGTTTTAACCCTTTCTGATTATTTATTTTTTATCATCCGGGAATCGTTATGTCTTCGT