Homologs in group_1765

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12285 FBDBKF_12285 100.0 Morganella morganii S1 glpQ glycerophosphodiester phosphodiesterase
EHELCC_14020 EHELCC_14020 100.0 Morganella morganii S2 glpQ glycerophosphodiester phosphodiesterase
NLDBIP_15115 NLDBIP_15115 100.0 Morganella morganii S4 glpQ glycerophosphodiester phosphodiesterase
LHKJJB_15495 LHKJJB_15495 100.0 Morganella morganii S3 glpQ glycerophosphodiester phosphodiesterase
F4V73_RS17115 F4V73_RS17115 85.7 Morganella psychrotolerans glpQ glycerophosphodiester phosphodiesterase
PMI_RS17860 PMI_RS17860 71.9 Proteus mirabilis HI4320 glpQ glycerophosphodiester phosphodiesterase

Distribution of the homologs in the orthogroup group_1765

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1765

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09394 0.0 553 73 1 348 1 glpQ Glycerophosphodiester phosphodiesterase, periplasmic Escherichia coli (strain K12)
Q06282 1.43e-160 457 59 2 354 1 glpQ Glycerophosphodiester phosphodiesterase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O30405 7.13e-131 381 50 2 352 1 glpQ Glycerophosphodiester phosphodiesterase Treponema pallidum (strain Nichols)
Q9SD81 6.03e-32 126 31 13 343 2 GDPD6 Glycerophosphodiester phosphodiesterase GDPD6 Arabidopsis thaliana
Q9C907 3.21e-30 122 30 12 343 2 GDPD5 Glycerophosphodiester phosphodiesterase GDPD5 Arabidopsis thaliana
P37965 4.17e-24 103 28 13 348 1 glpQ Glycerophosphodiester phosphodiesterase Bacillus subtilis (strain 168)
O07592 8.64e-12 67 40 1 83 3 yhdW Putative glycerophosphodiester phosphodiesterase YhdW Bacillus subtilis (strain 168)
Q8RB32 8.64e-12 67 24 12 338 1 UgpQ Glycerophosphodiester phosphodiesterase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P54527 2.78e-09 60 24 14 324 4 yqiK Uncharacterized protein YqiK Bacillus subtilis (strain 168)
P9WMU3 4.16e-09 60 36 1 90 1 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMU2 4.16e-09 60 36 1 90 3 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A0A8F4N283 4.14e-08 57 22 11 327 1 bagdpd Glycerophosphodiester phosphodiesterase Bacillus altitudinis
O14169 1.39e-06 53 38 1 86 3 SPAC4D7.02c Phosphatidylglycerol phospholipase C Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9HCC8 1.63e-06 53 32 1 89 1 GDPD2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Homo sapiens
Q9ESM6 2.09e-06 53 32 1 89 1 Gdpd2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Mus musculus
Q9JL56 1.92e-05 49 40 0 66 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Mus musculus
Q9JL55 2.03e-05 49 40 0 66 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Rattus norvegicus
Q9NZC3 2.51e-05 49 30 5 146 1 GDE1 Glycerophosphodiester phosphodiesterase 1 Homo sapiens
Q3T0T0 2.68e-05 49 32 1 105 2 GDE1 Glycerophosphodiester phosphodiesterase 1 Bos taurus
Q8WTR4 8.84e-05 48 37 0 66 1 GDPD5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Homo sapiens
Q8N9F7 9.05e-05 47 31 1 97 1 GDPD1 Lysophospholipase D GDPD1 Homo sapiens
Q08959 0.0002 46 43 0 55 1 PGC1 Phosphatidylglycerol phospholipase C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q21407 0.000207 47 28 11 203 3 gpcp-1 Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 1 Caenorhabditis elegans
Q9CRY7 0.000295 45 40 0 61 1 Gdpd1 Lysophospholipase D GDPD1 Mus musculus
Q0VGK4 0.000298 45 40 0 61 2 Gdpd1 Lysophospholipase D GDPD1 Rattus norvegicus
Q7L5L3 0.000339 45 41 0 56 1 GDPD3 Lysophospholipase D GDPD3 Homo sapiens
P75367 0.000479 44 38 0 60 4 MPN_420 Uncharacterized protein MG293 homolog Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q640M6 0.000549 45 36 0 66 1 Gdpd5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Mus musculus
P47535 0.000709 44 35 0 62 4 MG293 Uncharacterized protein MG293 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q99LY2 0.000729 44 42 0 56 1 Gdpd3 Lysophospholipase D GDPD3 Mus musculus

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_14615
Feature type CDS
Gene glpQ
Product glycerophosphodiester phosphodiesterase
Location 105017 - 106099 (strand: 1)
Length 1083 (nucleotides) / 360 (amino acids)

Contig

Accession ZDB_693
Length 123756 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1765
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03009 Glycerophosphoryl diester phosphodiesterase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0584 Lipid transport and metabolism (I) I Glycerophosphoryl diester phosphodiesterase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Glycerophospholipid metabolism -

Protein Sequence

MNIPRQFYLVSALAGAMICGSAAFAADNKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDELIVLHDHYLDRVTDVAKRFPDRARKDGRYYAIDFTLAEIKSLKFTEGFEIENGKAVQKYPGRFPMGKSDFRIHTFQEELEFIQGLNHSTGKNTGIYPEIKAPWFHRQEGKDITRKTLEVLKAYGYQTKDSGVFLQCFDPNELKRIKNELMPEMKMDLMLIQLIAYTDWQETFEQNAEGKWVNYNYDWMMAPGAMSKIAAYADGIGPDYHMLISKESKPGHITLTPMAKEAHASQLMIHPFTVRADALPPYAENTEQLFDAIYIQAGAEGLFTDFPDKGIQFLQKHKLHQ

Flanking regions ( +/- flanking 50bp)

AAACATCACGATGAAATCGCCCGCAATAAAGCATAAGCGGAGACAGACAGATGAATATACCCCGTCAGTTTTATCTTGTCAGTGCCCTTGCGGGTGCCATGATCTGCGGCTCTGCCGCTTTTGCGGCAGACAATAAGATTGTGATTGCACATCGCGGTGCCAGCGGCTATCTGCCGGAGCATACCCTGCCGGCCAAAGCGATGGCATATGCGCAGGGTGCTGATTATCTGGAACAGGATCTGGTGATGACCAAAGATGATGAACTCATCGTCCTGCATGACCATTATCTCGACCGTGTTACCGATGTGGCAAAACGCTTTCCGGATCGCGCGCGTAAGGATGGCCGTTACTACGCCATCGATTTTACCCTCGCGGAAATTAAATCCCTGAAATTTACGGAGGGGTTTGAAATCGAAAACGGTAAAGCGGTACAAAAATATCCGGGTCGTTTTCCGATGGGAAAATCAGATTTCCGTATTCATACCTTTCAGGAAGAACTTGAGTTCATTCAGGGTCTGAATCATTCCACCGGAAAAAACACCGGGATTTACCCGGAAATCAAAGCGCCGTGGTTCCACCGTCAGGAAGGTAAAGATATCACCCGTAAAACCCTGGAAGTGCTGAAAGCCTACGGCTACCAGACTAAAGATTCCGGGGTATTTCTTCAGTGTTTCGATCCGAATGAATTAAAGCGCATCAAAAATGAGCTGATGCCGGAAATGAAGATGGATTTGATGCTGATACAGCTGATCGCTTACACCGACTGGCAGGAAACATTTGAACAGAATGCGGAAGGCAAATGGGTCAACTATAACTACGACTGGATGATGGCTCCCGGTGCGATGAGTAAAATCGCAGCATATGCTGATGGTATCGGGCCTGATTATCATATGCTTATCAGCAAGGAGTCCAAACCGGGTCACATCACTCTGACGCCGATGGCAAAAGAGGCACACGCTTCGCAACTGATGATCCATCCGTTTACTGTCCGCGCGGATGCCTTGCCGCCGTATGCGGAAAACACTGAACAGTTATTTGATGCTATTTATATTCAGGCCGGAGCAGAAGGGTTATTTACTGATTTTCCGGACAAAGGCATACAGTTTCTGCAAAAACATAAACTGCATCAGTGATCACTACTCTGTTGCGAAACAGAACAACGGGCACAATAGTGCCCGTTTTC