Orthogroup:group_1765


Homologs in group_1765

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12285 FBDBKF_12285 Morganella morganii S1 glpQ glycerophosphodiester phosphodiesterase
EHELCC_14020 EHELCC_14020 Morganella morganii S2 glpQ glycerophosphodiester phosphodiesterase
NLDBIP_15115 NLDBIP_15115 Morganella morganii S4 glpQ glycerophosphodiester phosphodiesterase
LHKJJB_15495 LHKJJB_15495 Morganella morganii S3 glpQ glycerophosphodiester phosphodiesterase
HKOGLL_14615 HKOGLL_14615 Morganella morganii S5 glpQ glycerophosphodiester phosphodiesterase
F4V73_RS17115 F4V73_RS17115 Morganella psychrotolerans glpQ glycerophosphodiester phosphodiesterase
PMI_RS17860 PMI_RS17860 Proteus mirabilis HI4320 glpQ glycerophosphodiester phosphodiesterase

Distribution of group_1765 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1765 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1765

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1765.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glpQ 7

Product

# Product Occurence
1 glycerophosphodiester phosphodiesterase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0584 7 I Lipid transport and metabolism (I) Glycerophosphoryl diester phosphodiesterase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01126 7 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Glycerophospholipid metabolism -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03009 7 Glycerophosphoryl diester phosphodiesterase family

Annotations of the 32 SwissProt hits

Annotation Number of occurrences
Glycerophosphodiester phosphodiesterase 5
Glycerophosphodiester phosphodiesterase 1 4
Glycerophosphodiester phosphodiesterase GDPD5 1
Glycerophosphodiester phosphodiesterase GDPD6 1
Glycerophosphodiester phosphodiesterase domain-containing protein 4 2
Glycerophosphodiester phosphodiesterase domain-containing protein 5 2
Glycerophosphodiester phosphodiesterase, periplasmic 1
Glycerophosphoinositol inositolphosphodiesterase GDPD2 2
Lysophospholipase D GDPD1 3
Lysophospholipase D GDPD3 2
Phosphatidylglycerol phospholipase C 2
Probable glycerophosphodiester phosphodiesterase 1 2
Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 1 1
Putative glycerophosphodiester phosphodiesterase YhdW 1
Uncharacterized protein MG293 1
Uncharacterized protein MG293 homolog 1
Uncharacterized protein YqiK 1

Protein length

Min length 357
Max length 360
Mean length (sd) 359.4 (1.1)
Median length 360.0

Protein length distribution