Homologs in group_1457

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09285 FBDBKF_09285 100.0 Morganella morganii S1 - IpaD/SipD/SspD family type III secretion system needle tip protein
EHELCC_10125 EHELCC_10125 100.0 Morganella morganii S2 - IpaD/SipD/SspD family type III secretion system needle tip protein
NLDBIP_10470 NLDBIP_10470 100.0 Morganella morganii S4 - IpaD/SipD/SspD family type III secretion system needle tip protein
LHKJJB_10885 LHKJJB_10885 100.0 Morganella morganii S3 - IpaD/SipD/SspD family type III secretion system needle tip protein
F4V73_RS10680 F4V73_RS10680 34.7 Morganella psychrotolerans - hypothetical protein
PMI_RS13210 PMI_RS13210 24.7 Proteus mirabilis HI4320 - IpaD/SipD/SspD family type III secretion system needle tip protein

Distribution of the homologs in the orthogroup group_1457

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1457

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13945
Feature type CDS
Gene -
Product IpaD/SipD/SspD family type III secretion system needle tip protein
Location 90084 - 91571 (strand: -1)
Length 1488 (nucleotides) / 495 (amino acids)

Contig

Accession ZDB_692
Length 124746 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1457
Orthogroup size 7
N. genomes 7

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Genomic region

Protein Sequence

MRLENWLKTNKEVDDLSYDPSLHNDFMRLGIIYDALTVTERIPYDDAVKYIREYYDIVNDSNFKNNIKNKVIMHEECEGLINKTRVIVDRIEQEQIKSMAGRFWEHFYEDKVKQIYSELDRINYILSDPDTTREQALKELEAYDILMKDKENIKAINNAGDNISEKIRLINKGIQEYFIIRDMVTFGYFVERMDNVSVYAYDISVKYQREGMNKYVDYYKSVATKLNTFGDYIDEPINDGKQNKVYKRKFYTELYNTMKPYFYYGDSVGHTLYTGSMKIVKVGDDKFNVLVDDKVIEENLSYKDAYGKMEYFFSCHEPVIKGTKLCKIFKPVLDEFNNVIGLEGKVEQFLFPYELYSFMDLASDEKGLNRINENFDKCFKDKSPDLSRWNNVNEKSIAATSDVKYTREILKKNYDAGFISYYENEEERNEYSKFYQHEINSMNQKIDGAKKGLQLTLDEYTQRYNTINSNYDNMLRTITTMISELAQELKGFLRF

Flanking regions ( +/- flanking 50bp)

AATGAGCGGGAACAAGCAATACATTATATATCAATGCTGGAAGGTGGATGATGCGTTTGGAAAATTGGTTGAAAACAAATAAAGAAGTTGATGATCTCAGTTATGATCCCTCATTGCATAATGATTTTATGAGGCTTGGGATAATATATGATGCGCTCACGGTTACAGAGAGAATTCCGTATGATGATGCTGTGAAATATATAAGAGAATACTACGATATAGTAAATGATAGTAACTTTAAGAATAATATTAAAAATAAAGTTATAATGCATGAAGAGTGTGAGGGATTGATTAATAAAACGAGGGTGATTGTTGATAGAATTGAACAAGAACAGATTAAATCTATGGCGGGTAGATTTTGGGAGCACTTTTATGAAGATAAAGTAAAACAAATTTATAGCGAATTAGATAGGATTAATTATATTCTGTCGGATCCTGACACTACAAGAGAACAAGCATTAAAAGAACTTGAAGCATATGATATATTAATGAAGGATAAAGAAAATATAAAGGCAATTAATAATGCTGGTGATAATATTTCAGAGAAAATAAGATTGATAAATAAAGGTATTCAGGAGTATTTTATCATTAGGGATATGGTCACATTTGGTTACTTTGTTGAGAGAATGGATAATGTCAGTGTGTATGCTTATGATATTTCAGTTAAATATCAGCGCGAAGGTATGAACAAATATGTTGATTATTATAAAAGCGTAGCAACAAAATTAAATACATTTGGTGATTATATTGATGAGCCCATCAATGATGGAAAGCAGAATAAGGTATATAAAAGAAAGTTTTATACTGAATTATACAACACTATGAAACCTTATTTTTATTATGGAGATTCTGTTGGCCATACTTTATATACAGGTAGTATGAAGATAGTTAAGGTCGGTGACGATAAATTTAATGTTCTGGTTGATGATAAAGTAATAGAAGAAAATTTATCATATAAAGATGCATATGGAAAAATGGAATATTTCTTTTCTTGTCATGAGCCGGTTATTAAAGGGACTAAATTATGTAAAATATTTAAACCCGTACTGGATGAATTTAATAATGTTATTGGCTTAGAAGGGAAGGTTGAACAGTTTCTATTTCCTTATGAACTTTATAGTTTTATGGACTTAGCGAGCGATGAAAAAGGACTTAATCGTATAAATGAAAATTTTGATAAATGTTTCAAGGATAAATCACCAGATTTATCAAGGTGGAATAATGTTAATGAAAAATCAATAGCGGCTACCAGTGATGTAAAATATACCAGGGAAATTTTGAAAAAAAACTATGATGCAGGATTCATTAGTTATTATGAAAATGAAGAAGAAAGAAATGAATATTCTAAGTTTTATCAACATGAAATAAATAGTATGAATCAAAAAATAGATGGGGCTAAGAAAGGACTTCAATTAACGTTGGATGAATACACTCAGCGGTATAACACTATAAATAGTAACTATGACAATATGCTGAGAACAATTACAACAATGATTAGCGAATTGGCTCAGGAATTAAAGGGATTTTTAAGATTCTGATATAAAAAGGGAATTGTATGACTGTAATTATTGATAAAACATCAGATTTT