Homologs in group_2871

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10630 FBDBKF_10630 100.0 Morganella morganii S1 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains
EHELCC_14965 EHELCC_14965 100.0 Morganella morganii S2 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains
NLDBIP_14795 NLDBIP_14795 100.0 Morganella morganii S4 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains
LHKJJB_14550 LHKJJB_14550 100.0 Morganella morganii S3 rocR RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains
F4V73_RS14340 F4V73_RS14340 91.9 Morganella psychrotolerans - sigma 54-interacting transcriptional regulator

Distribution of the homologs in the orthogroup group_2871

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2871

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26047 1.8e-97 311 45 4 358 4 stc Signal-transduction and transcriptional-control protein Clostridium beijerinckii
Q9ZIB7 1.08e-86 280 32 11 530 1 tyrR HTH-type transcriptional regulatory protein TyrR Enterobacter agglomerans
P54529 8.99e-86 283 43 4 363 4 yqiR Putative sigma L-dependent transcriptional regulator YqiR Bacillus subtilis (strain 168)
P0A2D7 5.9e-84 273 34 11 531 3 tyrR HTH-type transcriptional regulatory protein TyrR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2D8 5.9e-84 273 34 11 531 3 tyrR HTH-type transcriptional regulatory protein TyrR Salmonella typhi
Q06065 1.08e-83 271 44 9 350 1 atoC Regulatory protein AtoC Escherichia coli (strain K12)
O54426 6.99e-80 262 32 11 531 3 tyrR HTH-type transcriptional regulatory protein TyrR Citrobacter braakii
P38022 3.63e-79 259 36 13 449 1 rocR Transcriptional activator RocR Bacillus subtilis (strain 168)
P07604 2.26e-78 258 32 9 529 1 tyrR HTH-type transcriptional regulatory protein TyrR Escherichia coli (strain K12)
P54930 5.74e-76 252 52 2 243 4 nifA Nif-specific regulatory protein Enterobacter agglomerans
P71229 1.25e-75 255 41 7 356 1 hyfR DNA-binding transcriptional activator HyfR Escherichia coli (strain K12)
P05407 2.61e-75 252 48 2 279 1 nifA Nif-specific regulatory protein Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q46802 3.11e-75 252 33 7 468 4 uacR Putative uric acid sigma-54-dependent transcriptional regulator UacR Escherichia coli (strain K12)
D5ARW9 3.43e-74 249 45 1 278 4 nifA1 Nif-specific regulatory protein Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P0CY94 3.43e-74 249 45 1 278 4 nifA1 Nif-specific regulatory protein Rhodobacter capsulatus
Q01265 1.59e-73 239 46 0 243 4 None Uncharacterized protein in HyuA 5'region (Fragment) Pseudomonas sp. (strain NS671)
P56266 2.31e-73 245 50 1 244 3 nifA Nif-specific regulatory protein Klebsiella oxytoca
P03027 2.76e-73 245 50 1 244 1 nifA Nif-specific regulatory protein Klebsiella pneumoniae
P54929 1.78e-72 246 50 2 253 4 nifA Nif-specific regulatory protein Azospirillum lipoferum
P54931 2.01e-72 244 47 1 258 4 nifA Nif-specific regulatory protein Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
Q43965 3.03e-72 243 47 3 258 1 mopR Phenol regulator MopR Acinetobacter guillouiae
P30667 3.32e-72 245 49 2 253 1 nifA Nif-specific regulatory protein Azospirillum brasilense
P29267 4.88e-72 241 40 7 351 3 hoxA Hydrogenase transcriptional regulatory protein HoxA Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P09570 9.39e-72 241 46 2 265 4 nifA Nif-specific regulatory protein Azotobacter vinelandii
P09133 9.39e-72 243 48 2 263 2 nifA Nif-specific regulatory protein Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P12627 2.49e-71 240 42 6 332 1 vnfA Nitrogen fixation protein VnfA Azotobacter vinelandii
P12626 9.55e-71 239 52 2 238 4 anfA Nitrogen fixation protein AnfA Azotobacter vinelandii
P24426 2.16e-70 233 45 2 257 4 nifA Nif-specific regulatory protein Rhizobium leguminosarum bv. trifolii
P27713 2.61e-70 238 49 2 244 4 nifA Nif-specific regulatory protein Herbaspirillum seropedicae
P0CL46 7.27e-70 240 50 2 238 1 fhlA Formate hydrogenlyase transcriptional activator Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1WAA4 7.73e-70 240 50 2 238 3 fhlA Formate hydrogenlyase transcriptional activator Salmonella typhimurium (strain SL1344)
G3XCV0 1.79e-69 234 44 6 315 1 fleQ Transcriptional regulator FleQ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P19323 2.84e-69 239 49 3 255 1 fhlA Formate hydrogenlyase transcriptional activator FhlA Escherichia coli (strain K12)
O85057 6.18e-69 234 33 9 460 1 None Limonene hydroxylase Geobacillus stearothermophilus
P25852 8.75e-69 231 41 7 319 1 zraR Transcriptional regulatory protein ZraR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P17899 1.03e-68 231 38 5 327 4 flbD Transcriptional regulatory protein FlbD Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q53206 1.05e-68 235 46 1 258 4 nifA Nif-specific regulatory protein Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P0AFU5 1.98e-68 230 49 3 235 1 qseF Transcriptional regulatory protein QseF Escherichia coli O157:H7
P0AFU4 1.98e-68 230 49 3 235 1 glrR Transcriptional regulatory protein GlrR Escherichia coli (strain K12)
Q9APD9 3.63e-68 229 39 4 318 3 zraR Transcriptional regulatory protein ZraR Klebsiella oxytoca
Q9K4U8 6.67e-68 231 51 3 241 2 norR2 Nitric oxide reductase transcription regulator NorR2 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P41789 2.24e-67 228 39 7 339 1 glnG DNA-binding transcriptional regulator NtrC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z333 4.69e-67 226 40 6 318 3 zraR Transcriptional regulatory protein ZraR Salmonella typhi
P14375 8.45e-67 226 40 6 319 1 zraR Transcriptional regulatory protein ZraR Escherichia coli (strain K12)
P03028 9.36e-67 228 47 2 269 4 nifA Nif-specific regulatory protein Rhizobium meliloti (strain 1021)
A8GG93 9.68e-67 228 42 5 327 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Serratia proteamaculans (strain 568)
Q3K999 1.4e-66 223 48 2 235 3 sfnR Sigma54-dependent transcriptional regulator SfnR Pseudomonas fluorescens (strain Pf0-1)
P0AFB8 1.42e-66 226 38 6 351 1 glnG DNA-binding transcriptional regulator NtrC Escherichia coli (strain K12)
P0AFB9 1.42e-66 226 38 6 351 3 glnG DNA-binding transcriptional regulator NtrC Escherichia coli O157:H7
P31908 2.03e-66 226 39 7 365 3 hoxA Hydrogenase transcriptional regulatory protein HoxA Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P09828 2.28e-66 227 46 2 259 4 nifA Nif-specific regulatory protein Rhizobium leguminosarum
A6TCX4 2.51e-66 226 48 4 256 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
P28787 3.62e-66 225 47 2 247 3 ntrC DNA-binding transcriptional regulator NtrC Proteus hauseri
Q8X613 1.36e-65 223 38 4 318 3 zraR Transcriptional regulatory protein ZraR Escherichia coli O157:H7
P06519 1.58e-65 226 49 4 236 4 xylR Transcriptional regulatory protein XylR Pseudomonas putida
A4WDR5 1.6e-65 224 42 6 313 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Enterobacter sp. (strain 638)
Q6D8R9 2.38e-65 224 40 9 338 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P03029 2.94e-65 223 39 6 334 1 ntrC DNA-binding transcriptional regulator NtrC Klebsiella pneumoniae
Q845S7 4e-65 219 48 2 235 2 sfnR Sigma54-dependent transcriptional activator SfnR Pseudomonas putida
A8ANR6 7.71e-65 223 45 5 278 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B5FSZ0 9.9e-65 222 42 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella dublin (strain CT_02021853)
O25408 1.65e-64 218 50 4 234 1 flgR Transcriptional regulatory protein FlgR Helicobacter pylori (strain ATCC 700392 / 26695)
C0PWN2 1.83e-64 221 42 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella paratyphi C (strain RKS4594)
B5XVA2 2.87e-64 221 44 8 301 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Klebsiella pneumoniae (strain 342)
P45671 3.72e-64 220 44 3 274 3 ntrC DNA-binding transcriptional regulator NtrC Azospirillum brasilense
B7N6T9 5.69e-64 220 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B5F363 6.09e-64 220 48 3 248 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella agona (strain SL483)
B4TF23 7.42e-64 220 42 7 321 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella heidelberg (strain SL476)
B7MZ04 7.95e-64 219 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O81 (strain ED1a)
O87455 8.13e-64 220 45 5 272 1 luxO Regulatory protein LuxO Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
B5Z370 8.29e-64 219 49 5 253 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X854 8.29e-64 219 49 5 253 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O157:H7
Q8FEN6 8.37e-64 219 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7UHC1 8.64e-64 219 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q00934 1.22e-63 218 44 2 245 1 pilR Response regulator protein PilR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8D4F9 1.22e-63 219 37 10 402 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Vibrio vulnificus (strain CMCP6)
Q8Z4C6 1.25e-63 219 41 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella typhi
A9N0D7 1.25e-63 219 41 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5QV88 1.25e-63 219 41 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella enteritidis PT4 (strain P125109)
Q57KT4 1.25e-63 219 41 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella choleraesuis (strain SC-B67)
B5RDG4 1.3e-63 219 41 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q5PF20 1.32e-63 219 41 7 325 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
O31551 1.41e-63 221 45 2 249 2 acoR Acetoin dehydrogenase operon transcriptional activator AcoR Bacillus subtilis (strain 168)
B7NSI9 1.45e-63 219 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
P37013 1.53e-63 219 49 5 253 1 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain K12)
B1XCN6 1.53e-63 219 49 5 253 2 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain K12 / DH10B)
C4ZYV4 1.53e-63 219 49 5 253 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain K12 / MC4100 / BW2952)
A9MFX7 2.34e-63 218 42 7 321 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
A7ZQD8 3.11e-63 218 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q0TEH1 3.6e-63 218 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7M9E6 4.72e-63 218 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O8 (strain IAI1)
B6I695 4.82e-63 218 48 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain SE11)
B4T3B0 5.26e-63 218 48 3 248 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella newport (strain SL254)
Q8ZMJ8 6.69e-63 217 48 3 248 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TT16 6.69e-63 217 48 3 248 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella schwarzengrund (strain CVM19633)
B1LQ27 6.95e-63 217 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain SMS-3-5 / SECEC)
Q9I4N3 8.19e-63 216 46 2 236 1 fleR Response regulator protein FleR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q1R7Z1 9.9e-63 217 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain UTI89 / UPEC)
A1AEP9 9.9e-63 217 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O1:K1 / APEC
B7MKH8 9.9e-63 217 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O45:K1 (strain S88 / ExPEC)
Q3YYF5 1.14e-62 216 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella sonnei (strain Ss046)
Q32CL9 1.18e-62 216 48 5 253 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella dysenteriae serotype 1 (strain Sd197)
P59402 1.26e-62 216 48 5 253 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella flexneri
Q0T1D4 1.26e-62 216 48 5 253 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella flexneri serotype 5b (strain 8401)
B1IUX0 1.5e-62 216 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q31X73 1.68e-62 216 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella boydii serotype 4 (strain Sb227)
A8A3I6 1.81e-62 216 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O9:H4 (strain HS)
B7LW25 1.83e-62 216 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q7MFY9 1.99e-62 216 37 9 384 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Vibrio vulnificus (strain YJ016)
P77743 4.44e-62 216 48 2 220 1 prpR Propionate catabolism operon regulatory protein Escherichia coli (strain K12)
B7LEC0 4.97e-62 215 47 4 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain 55989 / EAEC)
Q9HU19 5.58e-62 214 40 6 327 3 dctD C4-dicarboxylate transport transcriptional regulatory protein DctD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P28614 5.69e-62 218 40 7 314 1 acoR Acetoin catabolism regulatory protein Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q5E3W8 9.89e-62 214 41 6 315 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Aliivibrio fischeri (strain ATCC 700601 / ES114)
P0C5S5 1.05e-61 213 36 7 346 3 luxO Luminescence regulatory protein LuxO Vibrio harveyi
A7MVC2 1.05e-61 213 36 7 346 1 luxO Luminescence regulatory protein LuxO Vibrio campbellii (strain ATCC BAA-1116)
P10577 1.16e-61 213 45 1 231 1 ntrC DNA-binding transcriptional regulator NtrC Rhizobium meliloti (strain 1021)
Q9KT84 1.47e-61 212 42 3 265 1 luxO Regulatory protein LuxO Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9K4V0 1.72e-61 214 42 6 322 2 norR1 Nitric oxide reductase transcription regulator NorR1 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q87MX7 5.45e-61 211 39 3 294 3 luxO Regulatory protein LuxO Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A0KEJ0 7.45e-61 212 44 3 272 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
Q04848 2.47e-60 210 45 1 231 3 ntrC DNA-binding transcriptional regulator NtrC Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P74839 2.51e-60 211 43 3 248 4 prpR Propionate catabolism operon regulatory protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A4STH5 6.26e-60 209 48 2 234 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Aeromonas salmonicida (strain A449)
Q88RJ6 7.67e-60 207 36 3 326 3 algB Alginate biosynthesis transcriptional regulatory protein AlgB Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q7MM78 2.28e-59 206 41 2 262 3 luxO Regulatory protein LuxO Vibrio vulnificus (strain YJ016)
Q8CWJ5 2.28e-59 206 41 2 262 3 luxO Regulatory protein LuxO Vibrio vulnificus (strain CMCP6)
Q9KN48 7.52e-59 207 37 7 334 4 vasH Transcriptional regulator VasH Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P44694 1.03e-58 201 36 4 329 1 tyrR HTH-type transcriptional regulatory protein TyrR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q88AQ2 1.61e-58 204 37 5 327 3 algB Alginate biosynthesis transcriptional regulatory protein AlgB Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
P10576 1.88e-58 205 41 1 258 3 ntrC DNA-binding transcriptional regulator NtrC Bradyrhizobium sp. (strain RP501 Parasponia)
P23747 2.61e-56 198 44 2 231 1 algB Alginate biosynthesis transcriptional regulatory protein AlgB Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P37344 5.19e-55 191 35 4 316 1 pspF Psp operon transcriptional activator Escherichia coli (strain K12)
P36219 1.45e-53 187 37 8 309 4 wtsA Pathogenicity locus probable regulatory protein WtsA Pantoea stewartii subsp. stewartii
P13632 2e-53 191 41 4 250 1 dctD C4-dicarboxylate transport transcriptional regulatory protein DctD Rhizobium meliloti (strain 1021)
P10046 1.01e-51 186 34 6 345 3 dctD C4-dicarboxylate transport transcriptional regulatory protein DctD Rhizobium leguminosarum
P37931 1.03e-49 176 41 3 226 4 hrpS Pathogenicity locus probable regulatory protein HrpS Pseudomonas syringae pv. syringae
Q04849 2.44e-48 177 41 3 236 3 ntrX Nitrogen assimilation regulatory protein NtrX Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P45512 1.43e-46 176 28 4 367 4 dhaR Glycerol metabolism operon regulatory protein Citrobacter freundii
P26316 8.72e-46 166 35 6 302 4 hrpS Pathogenicity locus probable regulatory protein HrpS Pseudomonas savastanoi pv. phaseolicola
P76016 2.15e-45 172 29 7 389 1 dhaR PTS-dependent dihydroxyacetone kinase operon regulatory protein Escherichia coli (strain K12)
P37930 3.34e-45 164 39 4 221 4 hrpR Pathogenicity locus probable regulatory protein HrpR Pseudomonas syringae pv. syringae
P26408 7.44e-41 157 32 5 321 1 hupR1 Hydrogenase transcriptional regulatory protein HupR1 Rhodobacter capsulatus
Q68WH4 1.47e-36 145 37 4 213 3 RT0550 Putative response regulator NtrX-like Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q9ZCY9 2.7e-36 144 37 4 213 3 RP562 Putative response regulator NtrX-like Rickettsia prowazekii (strain Madrid E)
Q4UL27 8.18e-36 142 37 5 213 3 RF_0895 Putative response regulator NtrX-like Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RJS1 4.12e-35 140 36 3 212 3 RBE_0312 Putative response regulator NtrX-like Rickettsia bellii (strain RML369-C)
P54156 3.12e-34 135 35 6 247 2 yplP Putative sigma L-dependent transcriptional regulator YplP Bacillus subtilis (strain 168)
P38035 1.08e-31 132 30 4 265 4 rtcR Transcriptional regulatory protein RtcR Escherichia coli (strain K12)
Q92HC2 1.69e-31 130 35 4 212 3 RC0849 Putative response regulator NtrX-like Rickettsia conorii (strain ATCC VR-613 / Malish 7)
P09432 9.63e-28 119 30 5 260 3 ntrC DNA-binding transcriptional regulator NtrC Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P55610 4.75e-25 112 27 11 366 4 NGR_a02110 Putative transcriptional regulatory protein y4pA Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P23914 4.62e-16 85 34 9 217 3 levR Transcriptional regulatory protein LevR Bacillus subtilis (strain 168)
D0ZLR9 6.39e-14 78 26 11 295 2 dgaR Transcriptional regulatory protein DagR Salmonella typhimurium (strain 14028s / SGSC 2262)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13170
Feature type CDS
Gene rocR
Product RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains
Location 50787 - 52433 (strand: -1)
Length 1647 (nucleotides) / 548 (amino acids)
In genomic island -

Contig

Accession ZDB_691
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2871
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00158 Sigma-54 interaction domain
PF00989 PAS fold
PF18024 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3829 Transcription (K)
Signal transduction mechanisms (T)		 KT RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03721 transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport - -

Protein Sequence

MSAYRWLINTIDRVAMVEEVINEFSASEISINSMEVFPCKIYVKFNTECERDVKLLLSKLLLNPDVISVTRSKLQPYERKEKELQAILESTTDGIIGINNQGNINYFNKVAEDFFSISRENIVGVNISKILSGKNQSVLTKLLGGNSFDHYQMVTSTPKGELYYICSGRPILSEESQVMGAVITFKSLRSVQQMASSVNKSLPFSFDDIICESEIMMNLIDFAKKISISPYTVLIRGETGTGKELFARAIHNASDRSAHPFAPINCAALPENLIESELFGYEGGAFSGASKGGKMGLFESANHGTVFLDEFGELSLILQSKLLRVLQEGVIRRVGGHKEIPVDVRIIVATNRNLEEMIENKSFREDLYYRINVIPINIPPLKERKTDIPLLLQRFISKYTTELNKQLSLSQDAYHQLMAYSWPGNVRELQNVILRAIHLASGREITVGDLWLPHEEVMASPVLRPQPVPKTEIPPAVLPVQEDINLKESLARQEKSLLEDYLRRYGSARKVSREIGMSHTTVLNKARYYNLEHLLTYSTVRRSADKTD

Flanking regions ( +/- flanking 50bp)

GGTGGGTGAAAAATGAGCACTACATACACTAACCGGGAGTGACTAATCACATGTCTGCATATAGATGGTTAATTAATACCATTGACCGCGTCGCCATGGTGGAAGAAGTCATCAATGAATTTTCGGCCTCCGAAATCAGCATTAATTCCATGGAAGTCTTTCCGTGCAAAATTTATGTCAAATTCAATACGGAGTGCGAGCGGGATGTTAAGCTGCTGCTGAGCAAACTCCTGCTTAATCCTGATGTTATCAGTGTCACCCGTTCCAAATTACAGCCCTACGAGCGTAAAGAAAAAGAATTACAGGCGATTCTGGAATCCACCACGGACGGCATTATCGGTATCAATAATCAGGGTAATATCAACTACTTCAACAAAGTGGCGGAAGACTTTTTCTCGATCTCACGGGAAAATATTGTCGGCGTCAATATCAGCAAAATTCTCAGCGGCAAAAACCAGTCGGTGCTCACCAAACTGCTCGGCGGCAACAGTTTCGATCACTATCAGATGGTCACCAGTACGCCGAAAGGGGAGTTGTACTATATCTGCTCCGGCCGTCCGATTCTGAGTGAAGAGTCTCAGGTGATGGGGGCGGTTATCACCTTCAAGAGTCTGCGCTCAGTGCAGCAAATGGCGTCTTCGGTGAATAAAAGCCTGCCGTTCAGCTTTGATGACATTATCTGTGAAAGCGAAATCATGATGAACCTGATTGATTTCGCTAAAAAAATCTCAATAAGCCCGTATACGGTACTGATCCGCGGTGAAACCGGTACCGGTAAAGAGCTGTTTGCCCGCGCCATTCATAACGCCAGCGACCGCAGCGCTCACCCGTTTGCGCCGATTAACTGTGCGGCACTGCCGGAAAACCTGATTGAAAGTGAGCTGTTCGGTTATGAGGGCGGCGCGTTCAGCGGCGCCAGCAAGGGCGGAAAGATGGGGTTGTTTGAATCCGCCAACCACGGCACCGTGTTTCTGGATGAATTCGGCGAGCTTTCCCTTATCCTGCAAAGTAAATTACTGCGGGTATTACAGGAAGGCGTGATCCGCCGCGTCGGCGGGCACAAAGAGATCCCTGTGGATGTGCGGATCATTGTCGCCACCAACCGGAATCTGGAAGAGATGATCGAGAACAAATCGTTCCGTGAAGATCTCTATTACCGGATCAACGTGATCCCGATTAATATCCCGCCGCTGAAAGAGCGGAAGACGGATATCCCGCTGTTACTGCAGCGCTTTATCAGCAAATACACGACAGAGCTGAATAAACAGCTCAGTCTGTCCCAGGATGCATATCACCAGTTAATGGCCTATTCCTGGCCGGGTAACGTGCGGGAACTGCAAAACGTGATTTTGCGGGCCATCCATCTGGCTTCCGGCCGGGAAATTACCGTCGGGGATCTGTGGCTGCCCCATGAGGAAGTGATGGCCTCTCCGGTGCTCAGGCCGCAGCCGGTACCGAAAACGGAAATACCCCCTGCGGTATTGCCGGTGCAGGAAGATATCAACCTGAAAGAGTCTCTTGCGCGGCAGGAAAAAAGCCTGCTGGAAGATTATCTGCGCCGCTACGGTTCGGCCCGCAAAGTGTCCCGTGAAATCGGGATGTCTCACACCACCGTACTGAATAAAGCCCGTTACTATAATCTGGAGCATCTGCTGACCTACAGCACTGTGCGCCGGTCAGCAGACAAAACAGATTAATACGGATTATCATCCCCGCCGGCAGCGGTCCGGCGGGCGGTTTCGTAAGC