Homologs in group_1316

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08145 FBDBKF_08145 100.0 Morganella morganii S1 hdfR HTH-type transcriptional regulator HdfR
EHELCC_13385 EHELCC_13385 100.0 Morganella morganii S2 hdfR HTH-type transcriptional regulator HdfR
NLDBIP_13720 NLDBIP_13720 100.0 Morganella morganii S4 hdfR HTH-type transcriptional regulator HdfR
LHKJJB_12835 LHKJJB_12835 100.0 Morganella morganii S3 hdfR HTH-type transcriptional regulator HdfR
F4V73_RS18670 F4V73_RS18670 80.7 Morganella psychrotolerans hdfR HTH-type transcriptional regulator HdfR
PMI_RS16380 PMI_RS16380 63.0 Proteus mirabilis HI4320 hdfR HTH-type transcriptional regulator HdfR

Distribution of the homologs in the orthogroup group_1316

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1316

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A1JI47 2.05e-119 346 63 3 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JQ39 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 1.53e-116 338 62 4 284 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B7LUJ5 3.73e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q3YVK2 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 4.03e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B2TU26 4.96e-112 327 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q329U3 7.93e-112 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 7.93e-112 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 7.93e-112 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 7.93e-112 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 7.93e-112 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 7.93e-112 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 7.93e-112 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q1R4H3 1.04e-111 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 1.04e-111 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 1.04e-111 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 1.04e-111 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 1.04e-111 326 59 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B7NU32 1.34e-111 325 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7NF72 1.96e-111 325 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A2Q0 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 3.08e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B4SYF7 3.55e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
B5FN59 3.96e-110 322 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
B4TNR5 6.14e-110 321 58 2 274 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
P55181 2.78e-16 80 25 7 275 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
P36771 1.47e-13 72 30 0 148 1 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli (strain K12)
Q8VWE6 1.47e-13 72 30 0 148 3 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli O157:H7
Q9HWH8 8.47e-13 70 31 2 179 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P05827 4.51e-12 68 29 1 146 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
O32186 4.99e-12 68 31 1 141 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
P25544 5.86e-12 68 28 3 196 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P39647 7.86e-12 67 27 1 158 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P0A2Q2 1.03e-11 67 28 1 146 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 1.03e-11 67 28 1 146 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P94501 2.43e-11 66 34 3 126 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P52662 2.46e-11 66 28 0 145 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
P20668 3.36e-11 65 27 4 176 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
O06703 6.68e-11 65 30 1 155 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P27111 1.23e-10 63 28 5 235 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q8X4M5 3.1e-10 62 28 5 235 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
Q765S2 3.27e-10 62 36 3 119 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P77744 4.74e-10 62 26 1 142 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P77171 5.32e-10 62 27 6 243 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
A4QH19 7.09e-10 62 30 1 123 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
P16931 8.12e-10 61 27 0 141 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
P39592 8.72e-10 61 33 1 103 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P34818 2.76e-09 60 29 4 170 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
P0ACR0 3.61e-09 59 45 0 68 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 3.61e-09 59 45 0 68 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
Q9S4Y7 3.68e-09 59 43 0 69 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 3.68e-09 59 43 0 69 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57S50 4.28e-09 59 43 0 69 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
Q8FK66 4.57e-09 59 46 0 65 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 4.57e-09 59 46 0 65 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RF30 4.7e-09 59 46 0 65 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 4.7e-09 59 46 0 65 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P52693 4.81e-09 59 29 2 152 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52670 5.17e-09 59 45 1 72 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P23841 5.41e-09 59 42 0 71 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
P39127 5.62e-09 59 34 0 83 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P0ACQ4 6.07e-09 59 27 1 145 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 6.07e-09 59 27 1 145 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 6.07e-09 59 27 1 145 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
Q06610 6.08e-09 59 27 3 214 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P42722 9.33e-09 58 28 4 148 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P96194 9.68e-09 56 39 0 84 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
A7Z5E4 9.99e-09 58 30 1 141 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q8Z8R3 1.02e-08 58 43 0 69 3 allS HTH-type transcriptional activator AllS Salmonella typhi
P0A4T7 1.07e-08 58 26 1 141 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 1.07e-08 58 26 1 141 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P77559 1.97e-08 57 26 9 284 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
O07906 2.25e-08 57 23 2 170 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
P52659 2.29e-08 57 29 3 154 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
P49518 2.94e-08 57 23 1 140 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P52661 5.23e-08 56 25 1 141 1 gbpR HTH-type transcriptional regulator GbpR Azospirillum brasilense
P52667 5.66e-08 56 29 1 140 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
A0T0V5 6.5e-08 56 27 1 140 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
Q8YQ82 6.55e-08 56 27 2 159 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
A0T0G2 6.68e-08 56 26 2 149 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
Q3MCB5 8.56e-08 55 27 2 159 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
O33812 8.61e-08 55 25 1 135 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P96725 9.17e-08 55 27 3 188 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P71318 1.03e-07 55 26 1 145 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q9X725 1.03e-07 55 26 1 145 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P44821 1.04e-07 55 31 0 86 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37499 1.24e-07 55 26 2 152 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P45349 1.38e-07 55 43 0 67 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P11720 1.93e-07 54 29 0 116 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q85G62 2.24e-07 54 25 3 175 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
Q4G384 2.31e-07 54 28 2 140 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P73123 2.75e-07 54 27 2 146 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P52686 2.96e-07 54 25 1 158 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
Q6LMN6 3.06e-07 53 32 7 184 3 argP HTH-type transcriptional regulator ArgP Photobacterium profundum (strain SS9)
P52665 3.23e-07 52 34 2 102 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
O34685 3.28e-07 53 26 1 141 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
Q81IX0 6.61e-07 53 26 2 141 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
A0R8S0 6.71e-07 53 26 2 141 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q6HPH4 6.86e-07 53 26 2 141 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
P46068 6.87e-07 53 30 0 115 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
Q81VJ1 6.98e-07 53 26 2 141 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
Q63H01 7.32e-07 52 26 2 141 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 7.32e-07 52 26 2 141 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
O68014 7.9e-07 52 31 3 123 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P44418 8.1e-07 52 26 1 153 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52675 8.61e-07 50 40 3 80 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
P77700 8.62e-07 52 37 0 83 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
Q04778 8.76e-07 52 29 3 147 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
O19892 9.77e-07 52 28 4 163 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
Q47141 1.19e-06 52 36 0 79 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
P76369 1.51e-06 52 26 5 173 3 yeeY Uncharacterized HTH-type transcriptional regulator YeeY Escherichia coli (strain K12)
P45105 1.62e-06 52 27 3 146 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A5F9F9 2.02e-06 51 31 2 122 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6D1 2.07e-06 51 31 2 122 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P52696 2.23e-06 51 36 0 71 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P12529 2.51e-06 51 29 1 119 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P71025 2.62e-06 51 24 2 141 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
A5F9F1 4.21e-06 50 30 6 177 3 argP HTH-type transcriptional regulator ArgP Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0DV33 4.63e-06 50 27 5 170 1 admX HTH-type transcriptional regulator AdmX Serratia plymuthica
C3LRZ9 4.83e-06 50 30 6 177 3 argP HTH-type transcriptional regulator ArgP Vibrio cholerae serotype O1 (strain M66-2)
Q9KUN3 4.83e-06 50 30 6 177 3 argP HTH-type transcriptional regulator ArgP Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q57748 4.84e-06 50 28 2 138 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0ACR8 6.47e-06 50 40 0 59 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 6.47e-06 50 40 0 59 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P52044 8.31e-06 49 22 1 158 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
P42427 8.56e-06 49 31 0 86 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P70785 8.89e-06 49 36 1 88 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q88JX7 9.47e-06 50 36 1 77 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P74422 9.9e-06 49 28 3 146 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P52669 1.46e-05 48 29 1 110 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q9JXW7 1.54e-05 48 28 2 123 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P0A9G3 1.58e-05 48 25 2 169 3 nhaR Transcriptional activator protein NhaR Shigella flexneri
P0A9G2 1.58e-05 48 25 2 169 1 nhaR Transcriptional activator protein NhaR Escherichia coli (strain K12)
O32255 1.81e-05 48 27 5 160 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
Q6B936 1.99e-05 48 28 4 153 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
P24734 2.11e-05 48 31 1 119 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q5N5I5 2.6e-05 48 25 4 177 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 2.6e-05 48 25 4 177 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P0A9F6 2.63e-05 48 26 0 123 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 2.63e-05 48 26 0 123 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 2.63e-05 48 26 0 123 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P55576 2.71e-05 48 23 9 283 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q9KPI4 2.93e-05 48 41 0 65 3 VC_2383 Uncharacterized HTH-type transcriptional regulator VC_2383 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0ACR2 3.42e-05 48 33 0 71 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 3.42e-05 48 33 0 71 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
P30864 3.42e-05 48 35 0 80 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P45099 3.64e-05 47 25 2 172 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O33945 5.53e-05 47 26 1 123 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
Q9JPU9 5.61e-05 47 33 0 81 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P48271 6.08e-05 47 36 0 69 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P77309 7.31e-05 47 33 0 72 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
Q55459 9e-05 46 26 4 147 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q1XDT2 0.000101 46 38 0 63 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P52666 0.000107 46 27 6 192 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
Q05840 0.000121 46 30 0 86 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P52683 0.000126 46 26 1 119 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P9WMF5 0.000168 45 26 3 163 1 lysG HTH-type transcriptional regulator LysG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF4 0.000168 45 26 3 163 3 lysG HTH-type transcriptional regulator LysG Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P67666 0.000168 45 26 3 163 3 lysG HTH-type transcriptional regulator LysG Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P52660 0.000185 45 26 0 118 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P0ACQ9 0.000186 45 26 3 162 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 0.000186 45 26 3 162 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 0.000186 45 26 3 162 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P52691 0.000195 45 36 0 83 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P51205 0.000208 45 38 0 63 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
O52399 0.000263 45 29 6 167 3 argP HTH-type transcriptional regulator ArgP Edwardsiella ictaluri (strain 93-146)
O35038 0.000338 45 32 1 83 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
P37641 0.000342 45 25 4 162 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
P52595 0.000347 45 24 3 155 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P52676 0.000432 44 27 0 101 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
Q7MHL5 0.000468 44 27 8 197 3 argP HTH-type transcriptional regulator ArgP Vibrio vulnificus (strain YJ016)
P43160 0.0005 44 30 0 69 3 mprR Small neutral protease regulatory protein Streptomyces coelicolor
Q01610 0.000596 44 38 1 81 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P77333 0.000652 43 41 0 60 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P39376 0.000653 43 38 0 62 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)
P52692 0.000695 43 23 4 182 3 nhaR Transcriptional activator protein NhaR Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P75836 0.000733 43 31 0 83 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
O34827 0.000761 43 19 1 132 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P56885 0.001 43 23 3 158 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_12195
Feature type CDS
Gene hdfR
Product HTH-type transcriptional regulator HdfR
Location 161114 - 161926 (strand: 1)
Length 813 (nucleotides) / 270 (amino acids)

Contig

Accession ZDB_689
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1316
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K23773 LysR family transcriptional regulator, flagellar master operon regulator - -

Protein Sequence

MDTELLKTFLEVSKTRHFGRAAESLYLTQSAVSFRIRQLETNLGANLFTRHRNNIRLTAAGERLVPYAEALINTWQLAKQEINHASVHNPLSIGATASLWEACLTPWLGQIYQSHADLRLETRIASRQSLVKQLHARELDLLISTEQPKMDELKSEIVGEITLQLFSIQPLSAENPPGLIRLEWSADFQQHDEAVFTRCQSPVLTTSSAFQAKQLLSVTSSVTYLPAHWKKIYPELNPVDNDLITKPLYAVWLQNSDQQGLIGQLIAIPV

Flanking regions ( +/- flanking 50bp)

TGTAAAACAAAATATTTAAATCATAACGACAAAAATTTTTGGAGATACCAGTGGATACAGAATTACTGAAAACCTTTCTGGAGGTCAGTAAAACCCGTCACTTCGGGCGTGCGGCTGAATCCTTATACCTTACACAATCTGCAGTCAGCTTTAGGATCAGGCAGTTAGAGACAAATCTCGGGGCAAATCTTTTTACCCGCCACCGGAATAATATCCGCCTGACAGCCGCCGGCGAGCGGTTAGTACCTTATGCCGAAGCGCTGATCAATACCTGGCAACTGGCAAAACAGGAAATTAATCATGCCTCTGTACACAACCCGCTTTCCATCGGAGCGACTGCATCATTGTGGGAAGCTTGTCTGACCCCCTGGCTCGGACAGATCTACCAATCACATGCAGATCTGCGCCTGGAGACCAGAATCGCATCCCGCCAGTCTCTGGTAAAACAATTACATGCACGGGAGCTGGATTTACTGATCTCTACTGAACAACCAAAAATGGATGAACTGAAAAGTGAGATTGTCGGAGAAATCACACTTCAGCTGTTCAGCATACAACCGCTGTCGGCAGAAAATCCTCCGGGCCTTATCCGCCTGGAATGGAGTGCAGATTTTCAGCAGCATGATGAGGCTGTTTTCACCCGCTGCCAGTCTCCGGTTCTGACAACATCGTCTGCTTTTCAGGCAAAACAATTACTGTCAGTGACATCATCTGTCACTTATTTACCGGCACACTGGAAAAAAATATATCCCGAACTGAACCCCGTGGATAATGACCTGATTACAAAGCCTCTGTACGCTGTCTGGCTACAGAACAGTGATCAGCAGGGACTTATCGGTCAATTAATCGCAATACCGGTATAACGCCGGTTACTGATGATTTTAAAGATAGATAGTGCGGTAAGTAACTGTTG