Homologs in group_1316

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08145 FBDBKF_08145 63.0 Morganella morganii S1 hdfR HTH-type transcriptional regulator HdfR
EHELCC_13385 EHELCC_13385 63.0 Morganella morganii S2 hdfR HTH-type transcriptional regulator HdfR
NLDBIP_13720 NLDBIP_13720 63.0 Morganella morganii S4 hdfR HTH-type transcriptional regulator HdfR
LHKJJB_12835 LHKJJB_12835 63.0 Morganella morganii S3 hdfR HTH-type transcriptional regulator HdfR
HKOGLL_12195 HKOGLL_12195 63.0 Morganella morganii S5 hdfR HTH-type transcriptional regulator HdfR
F4V73_RS18670 F4V73_RS18670 62.6 Morganella psychrotolerans hdfR HTH-type transcriptional regulator HdfR

Distribution of the homologs in the orthogroup group_1316

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1316

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A1JI47 1.01e-115 337 61 5 287 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JQ39 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 2.52e-113 331 58 3 290 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B4TNR5 5.44e-98 291 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
P0A2Q0 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 1.29e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B5FN59 1.38e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
B4SYF7 1.58e-97 290 52 2 278 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
B7NF72 7.88e-96 286 54 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q3YVK2 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 4.05e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B7NU32 4.28e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q329U3 4.42e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 4.42e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 4.42e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 4.42e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 4.42e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 4.42e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 4.42e-95 284 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
B7LUJ5 6e-95 283 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q1R4H3 7.79e-95 283 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 7.79e-95 283 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 7.79e-95 283 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 7.79e-95 283 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 7.79e-95 283 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B2TU26 9.91e-95 283 53 2 270 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
P36771 5.5e-12 68 31 0 148 1 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli (strain K12)
Q8VWE6 5.77e-12 68 31 0 148 3 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli O157:H7
P25544 1.81e-11 66 28 3 157 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P55181 2.42e-11 66 26 2 167 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
P52662 3.86e-11 65 30 0 145 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
P23841 6.13e-11 65 38 3 104 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
O06703 6.35e-11 65 38 1 98 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
O32186 6.36e-11 65 31 1 156 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
Q9HWH8 2.12e-10 63 30 0 149 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A7Z5E4 3.14e-10 62 29 1 159 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P0A4T7 5.71e-10 62 26 4 209 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 5.71e-10 62 26 4 209 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P94501 8.15e-10 61 36 2 104 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P0A2Q2 8.17e-10 61 44 0 68 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 8.17e-10 61 44 0 68 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P05827 9.01e-10 61 44 0 68 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P42722 1.05e-09 61 30 5 153 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P52693 1.33e-09 61 31 4 154 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P20668 1.5e-09 60 27 2 165 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P45349 1.56e-09 60 42 0 78 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q765S2 2.73e-09 60 32 4 119 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P39127 5.15e-09 59 34 0 87 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P52665 5.65e-09 57 34 3 106 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P96194 6.11e-09 57 45 0 73 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P94387 7.06e-09 59 32 2 117 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
Q8FK66 1e-08 58 33 4 119 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 1e-08 58 33 4 119 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RF30 1.06e-08 58 33 4 119 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 1.06e-08 58 33 4 119 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P0ACR0 1.13e-08 58 33 4 119 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 1.13e-08 58 33 4 119 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P16931 2.37e-08 57 24 0 141 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
P77171 2.39e-08 57 23 5 239 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P44821 5.29e-08 56 25 4 186 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9S4Y7 6.26e-08 56 37 1 81 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 6.26e-08 56 37 1 81 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P39647 7.04e-08 56 33 3 122 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P52670 7.13e-08 55 41 0 67 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q57S50 7.48e-08 56 37 1 81 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
P27111 9.47e-08 55 28 1 149 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
A4QH19 1.05e-07 55 28 3 162 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
P39592 1.29e-07 55 36 0 75 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P77559 1.61e-07 55 34 2 102 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
Q8Z8R3 1.85e-07 54 37 1 81 3 allS HTH-type transcriptional activator AllS Salmonella typhi
P77700 2.29e-07 54 36 0 90 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P52675 2.29e-07 52 41 3 78 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
Q8X4M5 3.81e-07 53 28 1 149 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P52667 4.79e-07 53 27 2 140 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q85G62 7.74e-07 53 33 2 105 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P70785 1.08e-06 52 30 1 145 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q8YQ82 1.09e-06 52 33 1 93 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P52659 1.31e-06 52 40 1 77 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
Q3MCB5 1.5e-06 52 33 1 93 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q04778 1.67e-06 52 30 3 133 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
Q4G384 1.79e-06 52 39 3 94 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
P74422 2.45e-06 51 33 3 123 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P73123 2.56e-06 51 32 1 93 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O34685 2.68e-06 51 28 3 146 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
Q06610 3e-06 51 25 2 168 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
Q88JX7 4.27e-06 50 36 1 77 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P71025 4.27e-06 50 27 3 159 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
P49518 4.93e-06 50 23 3 139 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
O07906 5.35e-06 50 27 1 93 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
P0A9G3 5.45e-06 50 29 2 141 3 nhaR Transcriptional activator protein NhaR Shigella flexneri
P0A9G2 5.45e-06 50 29 2 141 1 nhaR Transcriptional activator protein NhaR Escherichia coli (strain K12)
Q6B936 6.92e-06 50 33 1 93 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
A0T0V5 7.89e-06 50 26 5 142 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P77309 9.27e-06 49 27 1 129 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P56885 1.02e-05 49 24 4 178 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)
P45105 1.06e-05 49 28 3 137 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52669 1.07e-05 49 28 3 146 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
O33945 1.14e-05 49 30 1 123 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
O69055 1.27e-05 48 28 5 139 3 ptxE Putative HTH-type transcriptional regulator protein PtxE (Fragment) Stutzerimonas stutzeri
P0ACQ9 1.3e-05 49 30 1 110 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 1.3e-05 49 30 1 110 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 1.3e-05 49 30 1 110 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P52044 1.36e-05 49 26 4 167 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
P0ACR8 1.38e-05 49 40 0 59 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 1.38e-05 49 40 0 59 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
Q6LMN6 1.4e-05 49 32 5 168 3 argP HTH-type transcriptional regulator ArgP Photobacterium profundum (strain SS9)
P77744 1.51e-05 48 22 2 170 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P96725 1.76e-05 48 27 3 155 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P52696 2.11e-05 48 35 0 70 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P46068 2.17e-05 48 40 0 69 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P30864 2.3e-05 48 36 0 80 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
A0T0G2 2.48e-05 48 25 3 140 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
Q1XDT2 2.5e-05 48 32 1 93 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
O32255 2.68e-05 48 25 4 148 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P52686 2.78e-05 48 30 1 97 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
P48271 2.93e-05 48 33 2 99 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
Q63H01 3.11e-05 48 27 3 150 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 3.11e-05 48 27 3 150 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
Q81VJ1 3.41e-05 47 27 3 150 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
P34818 3.43e-05 48 29 1 103 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
Q55459 3.5e-05 48 24 2 145 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q6HPH4 3.53e-05 47 27 3 150 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
P52666 3.73e-05 47 27 4 152 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
P0ACQ4 4.71e-05 47 32 2 94 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 4.71e-05 47 32 2 94 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 4.71e-05 47 32 2 94 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
P94403 5e-05 47 22 3 171 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P51205 5.01e-05 47 32 1 93 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
P0A9F6 5.2e-05 47 31 1 103 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 5.2e-05 47 31 1 103 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 5.2e-05 47 31 1 103 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
Q9X725 6.07e-05 47 32 2 94 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P52661 6.32e-05 47 24 1 138 1 gbpR HTH-type transcriptional regulator GbpR Azospirillum brasilense
Q9KPI4 7.5e-05 47 41 0 62 3 VC_2383 Uncharacterized HTH-type transcriptional regulator VC_2383 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9JXW7 7.98e-05 47 33 0 81 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P71318 8.06e-05 47 32 2 94 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
O33812 8.38e-05 46 22 1 178 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
Q9JPU9 8.59e-05 46 33 0 81 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
A0R8S0 8.88e-05 46 34 0 72 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
P43161 9.38e-05 47 28 4 144 3 mprR Small neutral protease regulatory protein Streptomyces lividans
Q81IX0 9.41e-05 46 34 0 72 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P58332 0.000104 46 22 3 169 3 cbbR HTH-type transcriptional regulator CbbR Rhizobium meliloti (strain 1021)
P07774 0.000106 46 27 6 205 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
O19892 0.000109 46 34 1 81 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
O78432 0.000114 46 31 1 93 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P70773 0.00012 46 25 6 201 3 argP HTH-type transcriptional regulator ArgP Aeromonas salmonicida
Q9L127 0.000129 46 28 4 144 3 mprR Small neutral protease regulatory protein Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P55576 0.00013 46 30 3 141 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P33634 0.000143 46 31 2 112 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
C3LRZ9 0.000162 45 25 5 195 3 argP HTH-type transcriptional regulator ArgP Vibrio cholerae serotype O1 (strain M66-2)
Q9KUN3 0.000162 45 25 5 195 3 argP HTH-type transcriptional regulator ArgP Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q08597 0.000167 45 25 3 170 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P52595 0.000173 45 26 3 147 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
A5F9F1 0.000181 45 25 5 195 3 argP HTH-type transcriptional regulator ArgP Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q57748 0.000222 45 34 1 81 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P44418 0.000231 45 24 3 156 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P12529 0.000252 45 26 1 126 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P20667 0.00027 45 45 1 61 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P24734 0.000276 45 28 3 135 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52691 0.000287 45 38 0 73 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q5N5I5 0.000305 45 42 0 59 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 0.000305 45 42 0 59 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52677 0.000315 45 35 0 68 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
Q9I6Z9 0.000411 44 30 1 96 3 bauR HTH-type transcriptional activator BauR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A2CI69 0.000476 44 38 0 55 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
P11720 0.000607 44 22 3 215 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O34827 0.000672 43 36 0 52 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P0A9G1 0.00073 43 26 1 146 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 0.00073 43 26 1 146 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 0.00073 43 26 1 146 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P45099 0.00074 43 40 0 57 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52676 0.001 43 27 4 138 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P77333 0.001 43 41 0 60 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P39376 0.001 43 38 0 62 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16380
Feature type CDS
Gene hdfR
Product HTH-type transcriptional regulator HdfR
Location 3612413 - 3613237 (strand: -1)
Length 825 (nucleotides) / 274 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1316
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K23773 LysR family transcriptional regulator, flagellar master operon regulator - -

Protein Sequence

MDTELLKTFLEVSKTRHFGRAAESLYLTQSAVSFRIRQLETQLGTNLFTRHRNNIRLTLAGERLIPYAESLMNTWLQAKKEISHASQHSELSIGATASLWDAYLTSWLQEAYLERNELRIESRVSTRQSLVKQLHARELDLLFTTEAPKMDELESKVIGNITFQLMKRASHLNQQSAQFIKIEWSADLSPLSQNSSAPKTEPILTTNSAMIAYQLMKTTNAVAFLPTHWLDLYPDLSPAAVEIIQKPLFAVWLNTSDQQVLIQQLLSQPVSNHQ

Flanking regions ( +/- flanking 50bp)

TGTAAAACAAAATATTTAAATCGTAACGACAAATTTTTTTGGAGATAGATGTGGATACCGAATTACTGAAAACCTTTTTGGAAGTCAGTAAGACAAGACACTTTGGCCGAGCCGCTGAATCTCTTTATTTAACACAGTCTGCGGTCAGTTTTAGAATACGCCAATTAGAAACCCAACTTGGGACAAATTTGTTTACTCGCCATCGTAACAATATTCGCTTAACACTCGCTGGAGAAAGGCTTATCCCTTATGCTGAGTCATTAATGAATACCTGGTTACAGGCAAAAAAAGAAATTAGCCACGCCTCCCAACACTCAGAACTTTCAATTGGTGCGACAGCATCGCTCTGGGACGCTTATCTAACCTCTTGGCTACAAGAGGCTTACTTAGAAAGAAATGAGCTTAGAATTGAATCTAGAGTCTCTACAAGGCAATCTCTAGTAAAGCAACTTCATGCTCGTGAGCTAGATCTGCTTTTTACTACAGAAGCACCCAAAATGGATGAGTTGGAAAGTAAAGTAATTGGCAATATCACATTTCAACTAATGAAAAGAGCATCACACCTGAACCAGCAAAGCGCACAATTTATCAAAATTGAGTGGAGTGCTGATTTGTCACCACTTTCACAAAATAGCTCTGCACCAAAAACAGAACCTATTTTGACAACAAATTCAGCTATGATTGCCTATCAGTTAATGAAAACAACAAATGCCGTTGCTTTTTTACCTACTCATTGGCTCGATTTATATCCCGATCTCTCACCAGCAGCAGTAGAGATCATCCAAAAACCGCTATTTGCTGTATGGCTCAATACCAGTGATCAACAAGTGTTAATTCAGCAACTACTTTCTCAACCTGTCTCCAACCATCAGTAGCATTGTGCTTCAGTCAAATTGATATATCAGTAATAAAATTGATGATTGAA