Homologs in group_277

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08585 FBDBKF_08585 100.0 Morganella morganii S1 - DNA-binding protein
EHELCC_12940 EHELCC_12940 100.0 Morganella morganii S2 - DNA-binding protein
NLDBIP_13280 NLDBIP_13280 100.0 Morganella morganii S4 - DNA-binding protein
LHKJJB_13275 LHKJJB_13275 100.0 Morganella morganii S3 - DNA-binding protein
F4V73_RS09810 F4V73_RS09810 96.1 Morganella psychrotolerans - DNA-binding protein
PMI_RS16935 PMI_RS16935 39.1 Proteus mirabilis HI4320 - DNA-binding protein
PMI_RS16940 PMI_RS16940 73.4 Proteus mirabilis HI4320 - DNA-binding protein

Distribution of the homologs in the orthogroup group_277

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_277

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P07636 4.54e-09 56 46 1 58 1 A DDE-recombinase A Escherichia phage Mu
P07040 1.92e-08 53 31 2 111 2 repc Repressor c protein Escherichia phage D108
P06019 1.21e-06 48 36 3 83 1 repc Repressor protein c Escherichia phage Mu

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_11755
Feature type CDS
Gene -
Product DNA-binding protein
Location 63439 - 63825 (strand: -1)
Length 387 (nucleotides) / 128 (amino acids)
In genomic island -

Contig

Accession ZDB_689
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_277
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02316 Mu DNA-binding domain

Protein Sequence

MKKEWYSAKELVGLAGLPSSPQGVNLMARREGWHQRRKRGVQGKAVEYSIDSLPDEVQAILHACDNSASYQAKRQDAFLIWVEAYYQLTREEREKIVTFILREGLAKLIQHLDAQELPGSREPDEKPE

Flanking regions ( +/- flanking 50bp)

AAGCACGGAAATTGCCGATTTTTTGCTGAAAATGGGTTGCAGGAGAAAAGATGAAAAAAGAATGGTATTCCGCGAAGGAATTGGTTGGTTTGGCGGGCTTGCCATCATCTCCTCAAGGTGTCAACCTGATGGCGAGACGGGAAGGCTGGCATCAGCGGCGCAAGCGCGGCGTGCAGGGAAAAGCAGTCGAATACAGTATCGATAGTCTGCCGGATGAAGTTCAGGCGATCCTGCATGCATGTGATAACAGCGCGAGCTATCAGGCGAAACGGCAGGATGCGTTTCTGATCTGGGTGGAAGCCTATTATCAGCTGACCAGAGAGGAACGGGAGAAAATTGTCACGTTCATTCTGCGGGAAGGGCTGGCTAAACTGATCCAGCATCTTGATGCACAGGAGCTTCCGGGCAGCCGGGAGCCGGACGAAAAACCGGAATAAAAAAACGGGATCTGTGAAGATCCCGTTTTCTCATGCAATGATCAGGCTGA