Homologs in group_1293

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07885 FBDBKF_07885 100.0 Morganella morganii S1 - putative TIM-barrel enzyme
EHELCC_13715 EHELCC_13715 100.0 Morganella morganii S2 - putative TIM-barrel enzyme
NLDBIP_14160 NLDBIP_14160 100.0 Morganella morganii S4 - putative TIM-barrel enzyme
LHKJJB_08690 LHKJJB_08690 100.0 Morganella morganii S3 - putative TIM-barrel enzyme
F4V73_RS13095 F4V73_RS13095 93.5 Morganella psychrotolerans - phosphoenolpyruvate hydrolase family protein
PMI_RS00730 PMI_RS00730 89.8 Proteus mirabilis HI4320 - phosphoenolpyruvate hydrolase family protein

Distribution of the homologs in the orthogroup group_1293

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1293

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55607 2.75e-143 406 73 0 272 4 NGR_a02140 Uncharacterized protein y4oV Sinorhizobium fredii (strain NBRC 101917 / NGR234)
A7M6E8 8.88e-119 360 63 0 270 1 tm-1 ToMV susceptible protein tm-1(GCR26) Solanum lycopersicum
A7M6E7 9.47e-119 360 63 0 270 1 Tm-1 ToMV resistance protein Tm-1(GCR237) Solanum lycopersicum
P55610 7.07e-47 168 34 3 253 4 NGR_a02110 Putative transcriptional regulatory protein y4pA Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P55605 3.21e-08 55 33 2 116 4 NGR_a02160 Uncharacterized protein y4oT Sinorhizobium fredii (strain NBRC 101917 / NGR234)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_08240
Feature type CDS
Gene -
Product putative TIM-barrel enzyme
Location 57810 - 58637 (strand: 1)
Length 828 (nucleotides) / 275 (amino acids)

Contig

Accession ZDB_685
Length 192328 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1293
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF09370 Phosphoenolpyruvate hydrolase-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5564 Function unknown (S) S Predicted TIM-barrel enzyme

Protein Sequence

MPLSRDALLKKFNDMISRGEPIIGGGAGTGLSAKCEEAGGIDLIVIYNSGRYRMAGRGSLAGLLAYGNANEIVMDMAKEVLPVVKHTPVLAGVNGTDPFCQFDKFLGDIKATGFSGVQNFPTVGLIDGKFRANLEETGMGYALEVEMIRKAHEKDLLTTPYVFSREDAIAMTEAGADILVPHMGLTTGGNIGAETATTLDDCVEMINDWAKAAKAVRPDIIVLCHGGPIATPEDAQYILDRCPDCHGFYGASSMERLPTEVALKATTEAFKNITR

Flanking regions ( +/- flanking 50bp)

TTTGTCATTGATCAACACCAGCAATTACGGGCGAAATAAGGAGACACAAGATGCCACTTTCCCGTGACGCATTACTGAAAAAATTCAATGACATGATTTCACGCGGCGAGCCGATTATCGGCGGCGGTGCCGGTACCGGTCTGTCAGCAAAATGTGAGGAAGCCGGCGGTATCGATCTCATCGTTATCTATAACTCCGGCCGTTACCGCATGGCAGGACGCGGCTCACTGGCCGGTCTGCTGGCTTACGGTAATGCCAACGAAATCGTCATGGATATGGCAAAAGAAGTGCTGCCGGTCGTGAAACATACGCCGGTTCTGGCGGGTGTCAACGGCACGGATCCGTTCTGTCAGTTTGACAAATTCCTCGGCGATATCAAAGCCACCGGGTTTTCCGGCGTACAGAACTTCCCGACAGTCGGCCTGATCGACGGTAAATTCCGCGCCAATCTGGAAGAAACCGGCATGGGTTACGCGCTGGAAGTGGAGATGATCCGCAAGGCACATGAAAAAGATCTGCTGACCACACCGTATGTTTTCAGTCGTGAAGATGCCATTGCCATGACCGAAGCCGGTGCGGATATTCTTGTGCCGCATATGGGTCTGACCACCGGCGGTAATATCGGGGCGGAAACCGCCACCACGCTGGATGACTGTGTTGAGATGATCAATGACTGGGCGAAAGCGGCCAAAGCTGTCCGTCCGGATATAATTGTATTGTGTCACGGCGGCCCTATCGCGACCCCGGAAGATGCACAATACATTTTAGATCGCTGCCCGGACTGCCACGGTTTTTACGGTGCCAGTTCCATGGAGCGTTTACCGACAGAAGTGGCATTAAAAGCCACCACAGAAGCGTTTAAAAATATAACAAGATAATTAAATTATTTATTTTTTAAGTCAACACCGGGTGCCTGCAATATATATTG