COG5564


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5564, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted TIM-barrel enzyme
Function(s) descr. Function unknown (S)

Occurence in the database

COG5564 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1293 FBDBKF_07885 106043 106870 -1 putative TIM-barrel enzyme Morganella morganii S1
1 group_1293 EHELCC_13715 80237 81064 -1 putative TIM-barrel enzyme Morganella morganii S2
2 group_1293 NLDBIP_14160 101112 101939 -1 putative TIM-barrel enzyme Morganella morganii S4
3 group_1293 LHKJJB_08690 57810 58637 1 putative TIM-barrel enzyme Morganella morganii S3
4 group_1293 HKOGLL_08240 57810 58637 1 putative TIM-barrel enzyme Morganella morganii S5
5 group_1293 F4V73_RS13095 235598 236425 1 phosphoenolpyruvate hydrolase family protein Morganella psychrotolerans
6 group_1293 PMI_RS00730 187837 188664 -1 phosphoenolpyruvate hydrolase family protein Proteus mirabilis HI4320