Homologs in group_302

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07975 FBDBKF_07975 100.0 Morganella morganii S1 - Ca2+-binding protein, RTX toxin-related
EHELCC_13805 EHELCC_13805 100.0 Morganella morganii S2 - Ca2+-binding protein, RTX toxin-related
NLDBIP_14250 NLDBIP_14250 100.0 Morganella morganii S4 - Ca2+-binding protein, RTX toxin-related
LHKJJB_08600 LHKJJB_08600 100.0 Morganella morganii S3 - Ca2+-binding protein, RTX toxin-related
F4V73_RS13010 F4V73_RS13010 78.3 Morganella psychrotolerans - serralysin family metalloprotease
F4V73_RS16265 F4V73_RS16265 30.9 Morganella psychrotolerans - calcium-binding protein
PMI_RS01355 PMI_RS01355 57.9 Proteus mirabilis HI4320 - serralysin family metalloprotease

Distribution of the homologs in the orthogroup group_302

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_302

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P07268 8.63e-172 495 56 6 481 1 None Serralysin Serratia marcescens (strain ATCC 21074 / E-15)
P23694 1.69e-170 492 55 6 481 1 None Serralysin Serratia marcescens
Q11137 4.56e-161 468 53 5 501 3 zapA Serralysin Proteus mirabilis
P19144 2.78e-150 440 51 8 477 1 prtC Serralysin C Dickeya chrysanthemi
Q07295 1.11e-146 431 50 9 475 1 prtA Serralysin A Dickeya chrysanthemi
Q1ID47 1.89e-138 410 50 9 464 1 aprA Metalloprotease AprA Pseudomonas entomophila (strain L48)
P16317 8.36e-136 403 49 10 475 1 prtC Serralysin C Dickeya chrysanthemi
Q03023 1.1e-135 403 48 10 495 1 aprA Serralysin Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P16316 3.11e-128 384 48 11 471 1 prtB Serralysin B Dickeya chrysanthemi
P82115 1.21e-124 375 51 9 408 1 prtA Serralysin Photorhabdus sp. (strain Az29)
Q84F70 2.1e-123 372 51 6 404 3 prtA1 Serralysin Photorhabdus luminescens
Q7N8R3 7.84e-123 370 51 6 404 3 prtA Serralysin Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A0A0C5CJR8 2.38e-121 366 50 13 466 1 aprA Metallopeptidase AprA Pseudomonas marginalis
Q07162 1.05e-117 357 47 8 468 1 prtG Serralysin G Dickeya chrysanthemi
Q9ZFG9 2.98e-12 72 40 2 119 1 algE7 Alginate lyase 7 Azotobacter vinelandii
Q9ZFG9 5.35e-10 65 51 1 74 1 algE7 Alginate lyase 7 Azotobacter vinelandii
Q9ZFG9 4.93e-07 56 45 2 77 1 algE7 Alginate lyase 7 Azotobacter vinelandii
Q44494 2.02e-10 67 46 2 105 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q44494 1.12e-07 58 40 1 85 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q44494 1.2e-07 58 43 2 95 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q44494 2.64e-07 57 41 2 96 1 algE1 Mannuronan C5-epimerase AlgE1 Azotobacter vinelandii
Q44496 6.53e-09 62 35 3 131 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 3.45e-07 57 48 2 85 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 6.35e-07 56 41 2 87 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 7.11e-07 55 42 2 76 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 8.51e-07 55 41 1 77 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 5.55e-06 53 38 2 96 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44496 6.42e-06 52 40 2 96 3 algE3 Mannuronan C5-epimerase AlgE3 Azotobacter vinelandii
Q44495 8.76e-08 58 41 2 82 1 algE2 Mannuronan C5-epimerase AlgE2 Azotobacter vinelandii
Q44495 1.45e-07 57 43 1 76 1 algE2 Mannuronan C5-epimerase AlgE2 Azotobacter vinelandii
Q44495 2.89e-07 57 37 2 110 1 algE2 Mannuronan C5-epimerase AlgE2 Azotobacter vinelandii
Q44495 4.13e-06 53 38 2 96 1 algE2 Mannuronan C5-epimerase AlgE2 Azotobacter vinelandii
Q44492 2.7e-07 57 37 2 108 2 algE5 Mannuronan C5-epimerase AlgE5 Azotobacter vinelandii
Q44492 3.02e-07 57 36 1 91 2 algE5 Mannuronan C5-epimerase AlgE5 Azotobacter vinelandii
Q44492 1.32e-06 54 38 1 86 2 algE5 Mannuronan C5-epimerase AlgE5 Azotobacter vinelandii
Q44492 6.99e-06 52 39 1 88 2 algE5 Mannuronan C5-epimerase AlgE5 Azotobacter vinelandii
Q44493 3.99e-07 56 42 1 92 1 algE4 Mannuronan C5-epimerase AlgE4 Azotobacter vinelandii
Q57506 1.89e-06 54 40 1 83 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q57506 8.09e-06 52 49 0 59 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q57506 4.25e-05 50 45 0 59 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q57506 0.000298 47 42 3 92 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q57506 0.000303 47 54 0 44 3 cya Bifunctional hemolysin/adenylate cyclase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P0DKX7 6.64e-06 52 38 1 83 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0DKX7 6.99e-06 52 49 0 59 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0DKX7 3.96e-05 50 45 0 59 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0DKX7 0.000173 48 42 3 92 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0DKX7 0.00028 47 54 0 44 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
J7QLC0 6.64e-06 52 38 1 83 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
J7QLC0 6.99e-06 52 49 0 59 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
J7QLC0 3.96e-05 50 45 0 59 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
J7QLC0 0.000173 48 42 3 92 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
J7QLC0 0.00028 47 54 0 44 1 cya Bifunctional hemolysin/adenylate cyclase Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)
Q9ZFH0 3.03e-05 50 40 2 105 1 algE6 Mannuronan C5-epimerase AlgE6 Azotobacter vinelandii
Q9ZFH0 0.000313 47 37 2 101 1 algE6 Mannuronan C5-epimerase AlgE6 Azotobacter vinelandii
P16462 4.47e-05 50 54 0 46 1 ltxA Leukotoxin Aggregatibacter actinomycetemcomitans
A1YKW7 0.000326 47 59 0 44 1 rtxA Cytolysin RtxA Kingella kingae
Q00951 0.000637 46 61 0 44 3 appA Hemolysin Actinobacillus suis
P15377 0.000677 46 61 0 44 3 apxIIA RTX-II toxin determinant A Actinobacillus pleuropneumoniae

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_08150
Feature type CDS
Gene -
Product Ca2+-binding protein, RTX toxin-related
Location 36923 - 38377 (strand: -1)
Length 1455 (nucleotides) / 484 (amino acids)

Contig

Accession ZDB_685
Length 192328 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_302
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00353 RTX calcium-binding nonapeptide repeat (4 copies)
PF08548 Peptidase M10 serralysin C terminal
PF13583 Metallo-peptidase family M12B Reprolysin-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2931 Secondary metabolites biosynthesis, transport and catabolism (Q) Q Ca2+-binding protein, RTX toxin-related

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01406 serralysin [EC:3.4.24.40] Cationic antimicrobial peptide (CAMP) resistance -

Protein Sequence

MGIATYGREDGWSFIDDVLSSPGRGNGRWINNKISYDAFDAGDYIARSNTGWNGAGVLGQPAEVTYSFPTWEGMYYNGAGNTGLTGFNDYQKDQARLSLQSWADVANITFKEVDAGRGEIYTNITFGYINDKYTQAYAWLPHTKNYFGDPYTDSRGFDVSGQSWYSSEPGALNVTPVTGNYGRLTFTHEIGHTLGLNHPGNYNAGQGRPSYKDADYAEDTRQYSVMSYWSEKITGADHKGYYASAPLLDDITAIQKLYGANYNIRTDDTVYGFGSNTGRDYYTAKSITDKLIFTVWDGGGNDTLNFSRYKQDQKISLREGDFSDVGGLSGNVSIAHGVVIENAFGGCGNDVIIGNDADNILKGNAGDDVLYGGAGQDQLWGGTGNDIFVFSAVTDSLYDHPDHIRDFSTGLDSIDLQGLNQNSAGEKFIYFTDEFTGAAGAAELRYNEGLNLTELLINISGDPYNYDFRVDITGQVNVHTDFIV

Flanking regions ( +/- flanking 50bp)

TTTAAGGATAAATTTCATTCTGTTTCATTATTACATTCGGAGATATTTTTATGGGTATCGCTACATACGGCAGGGAAGACGGATGGTCGTTTATCGATGATGTGTTAAGCAGCCCGGGACGGGGTAACGGACGCTGGATTAATAATAAAATTTCATATGATGCCTTTGATGCCGGAGATTACATTGCCAGATCCAATACCGGCTGGAATGGCGCGGGTGTGCTCGGGCAGCCCGCGGAAGTAACCTATTCATTCCCGACATGGGAGGGGATGTATTATAACGGCGCAGGAAACACCGGCCTGACGGGCTTTAATGATTATCAGAAAGATCAGGCCCGTTTATCACTGCAATCATGGGCTGATGTGGCAAATATTACCTTTAAGGAAGTGGACGCCGGCCGGGGGGAAATCTATACCAATATCACCTTCGGTTATATTAATGATAAATATACACAGGCTTACGCCTGGCTGCCGCACACCAAAAATTATTTTGGTGATCCGTACACCGACTCACGGGGCTTTGATGTTTCCGGCCAGTCCTGGTACAGCTCAGAACCCGGGGCACTGAATGTGACACCGGTGACCGGAAACTATGGCCGCCTGACATTTACTCATGAAATCGGTCATACCCTCGGGTTAAATCATCCGGGCAACTATAACGCCGGTCAGGGGCGTCCTTCCTATAAAGATGCGGATTATGCCGAAGATACCCGTCAGTACAGCGTGATGAGTTACTGGAGTGAGAAAATCACCGGTGCGGACCACAAAGGCTACTACGCTTCCGCGCCGCTGCTGGATGACATTACGGCGATTCAGAAACTGTACGGTGCAAATTATAACATCCGCACTGATGACACTGTTTATGGGTTTGGTTCCAATACCGGGCGCGATTATTACACCGCAAAGAGTATCACAGACAAGCTTATTTTCACCGTCTGGGACGGCGGTGGCAATGACACCCTGAATTTCTCCCGTTATAAGCAGGATCAGAAAATTTCCCTGCGCGAAGGGGATTTCTCGGATGTCGGCGGCCTGAGCGGAAATGTGTCAATTGCACACGGTGTGGTGATTGAAAATGCCTTCGGCGGGTGCGGAAATGATGTGATCATCGGCAATGATGCGGACAATATTCTGAAAGGCAATGCCGGGGATGATGTGCTGTACGGTGGTGCCGGGCAGGATCAGTTGTGGGGCGGTACCGGGAACGATATTTTCGTGTTCTCGGCGGTGACGGATTCCCTGTATGACCATCCGGATCATATCCGGGATTTTTCAACCGGCCTGGACAGTATTGATTTACAGGGACTGAATCAGAACAGCGCTGGGGAAAAATTCATTTATTTCACCGATGAATTTACCGGTGCGGCCGGTGCGGCCGAGCTCCGGTACAATGAAGGGCTGAACCTGACAGAGTTGCTGATTAATATCAGCGGAGATCCTTACAACTATGATTTCAGAGTGGATATCACCGGCCAGGTGAACGTTCACACTGACTTTATCGTTTAACACAGCAGGCGGGCGCGGCCGGTGCGGCGTCCGCAGCATTCAGGAAGGTA