Orthogroup:group_122



Homologs in group_122

Help

11 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07975 FBDBKF_07975 Morganella morganii S1 - Ca2+-binding protein, RTX toxin-related
EHELCC_13805 EHELCC_13805 Morganella morganii S2 - Ca2+-binding protein, RTX toxin-related
NLDBIP_14250 NLDBIP_14250 Morganella morganii S4 - Ca2+-binding protein, RTX toxin-related
LHKJJB_08600 LHKJJB_08600 Morganella morganii S3 - Ca2+-binding protein, RTX toxin-related
HKOGLL_08150 HKOGLL_08150 Morganella morganii S5 - Ca2+-binding protein, RTX toxin-related
F4V73_RS13010 F4V73_RS13010 Morganella psychrotolerans - serralysin family metalloprotease
PMI_RS01355 PMI_RS01355 Proteus mirabilis HI4320 - serralysin family metalloprotease
PMI_RS01360 PMI_RS01360 Proteus mirabilis HI4320 - M10 family metallopeptidase
PMI_RS01365 PMI_RS01365 Proteus mirabilis HI4320 - M10 family metallopeptidase C-terminal domain-containing protein
PMI_RS01370 PMI_RS01370 Proteus mirabilis HI4320 - M10 family metallopeptidase C-terminal domain-containing protein
PMI_RS01375 PMI_RS01375 Proteus mirabilis HI4320 - M10 family metallopeptidase C-terminal domain-containing protein

Distribution of group_122 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_122 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_122

Orthogroup content: 11 members

Help

This page summarizes the annotation of all members of the orthologous group group_122.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 11

Product

# Product Occurence
1 Ca2+-binding protein, RTX toxin-related 5
2 serralysin family metalloprotease 2
3 M10 family metallopeptidase 1
4 M10 family metallopeptidase C-terminal domain-containing protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2931 11 Q Secondary metabolites biosynthesis, transport and catabolism (Q) Ca2+-binding protein, RTX toxin-related

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01406 11 serralysin [EC:3.4.24.40] Cationic antimicrobial peptide (CAMP) resistance -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00353 11 RTX calcium-binding nonapeptide repeat (4 copies)
PF00413 5 Matrixin
PF08548 11 Peptidase M10 serralysin C terminal
PF13583 5 Metallo-peptidase family M12B Reprolysin-like

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG043807 1 serralysin family metalloprotease VF1332 Exotoxin

Annotations of the 60 SwissProt hits

Annotation Number of occurrences
Alginate lyase 7 1
Bifunctional hemolysin/adenylate cyclase 3
Collagen-like protein V6 1
Cytolysin RtxA 1
Exotoxin PaxA 1
Hemolysin 1
Hemolysin, chromosomal 1
Hemolysin, plasmid 1
Iron-regulated protein FrpA 2
Iron-regulated protein FrpC 2
Leukotoxin 17
Mannuronan C5-epimerase AlgE1 1
Mannuronan C5-epimerase AlgE2 1
Mannuronan C5-epimerase AlgE3 1
Mannuronan C5-epimerase AlgE4 1
Mannuronan C5-epimerase AlgE5 1
Mannuronan C5-epimerase AlgE6 1
Metallopeptidase AprA 1
Metalloprotease AprA 1
Multifunctional-autoprocessing repeats-in-toxin 2
Nodulation protein O 1
RTX-I toxin determinant A from serotypes 1/9 1
RTX-I toxin determinant A from serotypes 5/10 1
RTX-II toxin determinant A 1
RTX-III toxin determinant A from serotype 2 1
RTX-III toxin determinant A from serotype 8 1
S-layer protein 1
Serralysin 7
Serralysin A 1
Serralysin B 1
Serralysin C 2
Serralysin G 1

Protein length

Min length 484
Max length 687
Mean length (sd) 549.0 (89.3)
Median length 484.0

Protein length distribution