Homologs in group_1156

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06210 FBDBKF_06210 100.0 Morganella morganii S1 thiB thiamine ABC transporter substrate binding subunit
EHELCC_09255 EHELCC_09255 100.0 Morganella morganii S2 thiB thiamine ABC transporter substrate binding subunit
NLDBIP_09635 NLDBIP_09635 100.0 Morganella morganii S4 thiB thiamine ABC transporter substrate binding subunit
LHKJJB_08120 LHKJJB_08120 100.0 Morganella morganii S3 thiB thiamine ABC transporter substrate binding subunit
F4V73_RS15705 F4V73_RS15705 90.5 Morganella psychrotolerans thiB thiamine ABC transporter substrate binding subunit
PMI_RS11485 PMI_RS11485 73.2 Proteus mirabilis HI4320 thiB thiamine ABC transporter substrate binding subunit

Distribution of the homologs in the orthogroup group_1156

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1156

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31550 9.14e-156 442 65 0 310 1 thiB Thiamine-binding periplasmic protein Escherichia coli (strain K12)
Q7CR85 9.3e-155 439 64 0 309 1 thiB Thiamine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8FYV1 8.61e-124 361 51 1 317 3 thiB Thiamine-binding periplasmic protein Brucella suis biovar 1 (strain 1330)
Q57BC4 1.77e-123 360 51 1 317 3 thiB Thiamine-binding periplasmic protein Brucella abortus biovar 1 (strain 9-941)
Q2YLW8 1.77e-123 360 51 1 317 3 thiB Thiamine-binding periplasmic protein Brucella abortus (strain 2308)
Q8YJ02 4.48e-123 359 51 1 317 3 thiB Thiamine-binding periplasmic protein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P44984 5.41e-100 301 48 7 325 3 thiB Thiamine-binding periplasmic protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P72827 6.32e-06 51 23 8 267 1 futA1 Iron uptake protein A1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8DLH9 3.25e-05 48 19 12 301 2 idiA Iron deficiency-induced protein A Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_07670
Feature type CDS
Gene thiB
Product thiamine ABC transporter substrate binding subunit
Location 144666 - 145676 (strand: -1)
Length 1011 (nucleotides) / 336 (amino acids)
In genomic island -

Contig

Accession ZDB_684
Length 217237 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1156
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01547 Bacterial extracellular solute-binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4143 Coenzyme transport and metabolism (H) H ABC-type thiamine transport system, periplasmic component TbpA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02064 thiamine transport system substrate-binding protein ABC transporters -

Protein Sequence

MLQKLTRNIIAGGLAALFSFQAAADNSKPVLTVYTYDSFVAEWGPGPEIKKNFEAQCNCELKLVGLSDGVTLLNRLRMEGKKSQADIILGLDNNLMQAALDTGLFKESNVDQSKLVLPVKWESKTFIPYDYGWFAFIYNKDTLPNPPKSMKELLNSDQKLTIIYQDPRTSTPGLGLLLWMEKLYGDDVAAQWAKMANKTLTVTKGWSESYGLFLKGEADLVLSYTSSPGYHMLADNKDNYAAALFEEGHYLQVEMAGVLASSKHPALAEQFMQFMLTPDFQKTLPTTNWMYPVIDMPLPPVYDKMPKPAKTLEFDAKEVAKERNQWIRIWQNAVSR

Flanking regions ( +/- flanking 50bp)

TCATGCTGCACTCAGATCCTTTGCCAATCCTTCCCTTACAGGAGCGCAAAGTGTTACAGAAACTGACCAGAAATATCATTGCAGGCGGTCTTGCCGCACTGTTTTCTTTCCAGGCGGCTGCAGATAACAGCAAGCCGGTTCTGACTGTCTATACCTATGACTCATTTGTTGCCGAGTGGGGACCGGGACCGGAAATTAAGAAAAACTTTGAAGCGCAATGCAATTGCGAACTAAAACTCGTCGGTCTGAGTGACGGCGTGACGCTGCTGAACCGTCTGCGGATGGAAGGTAAAAAATCACAGGCCGATATCATCTTAGGTCTGGATAACAACCTGATGCAGGCGGCACTGGATACCGGACTGTTTAAAGAAAGCAATGTTGATCAGTCAAAACTGGTGCTGCCGGTCAAATGGGAAAGCAAAACCTTTATTCCTTATGACTACGGCTGGTTTGCCTTTATCTACAACAAAGACACCCTGCCGAACCCGCCGAAAAGCATGAAAGAACTGCTTAACAGTGATCAGAAGCTGACCATTATTTATCAGGATCCGCGCACCAGCACACCGGGACTGGGATTACTGCTGTGGATGGAAAAACTCTACGGGGATGATGTGGCGGCACAGTGGGCCAAAATGGCGAACAAGACCCTGACGGTCACCAAAGGCTGGAGTGAATCTTACGGCCTGTTCCTGAAAGGTGAAGCTGACCTGGTACTGAGTTATACCTCTTCGCCTGGTTACCACATGCTGGCAGATAACAAAGATAACTATGCCGCAGCACTGTTTGAGGAAGGACATTATCTTCAGGTGGAAATGGCAGGTGTACTGGCCTCCTCAAAACACCCGGCACTGGCGGAACAGTTCATGCAGTTTATGCTGACACCGGATTTCCAGAAAACGCTGCCGACCACCAACTGGATGTATCCTGTGATTGATATGCCGCTGCCGCCGGTTTACGACAAAATGCCGAAACCGGCGAAAACGCTGGAATTCGATGCAAAAGAAGTGGCGAAAGAGCGCAATCAGTGGATACGGATATGGCAAAACGCAGTCAGCCGTTAATTGCCGCGTACCTGATACCGGGCGCACTCGCGTCCGGTCTTCTTCTGGTC