Homologs in group_3223

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03105 FBDBKF_03105 100.0 Morganella morganii S1 - Glutamate synthase [NADPH] large chain
EHELCC_07430 EHELCC_07430 100.0 Morganella morganii S2 - Glutamate synthase [NADPH] large chain
NLDBIP_07755 NLDBIP_07755 100.0 Morganella morganii S4 - Glutamate synthase [NADPH] large chain
LHKJJB_07290 LHKJJB_07290 100.0 Morganella morganii S3 - Glutamate synthase [NADPH] large chain

Distribution of the homologs in the orthogroup group_3223

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3223

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09831 0.0 696 68 0 474 1 gltB Glutamate synthase [NADPH] large chain Escherichia coli (strain K12)
E1V8I1 0.0 549 59 2 466 1 gltB Glutamate synthase [NADPH] large chain Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
P55038 9.35e-136 430 49 7 456 1 gltS Ferredoxin-dependent glutamate synthase 2 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P39812 7.77e-130 413 48 5 455 1 gltA Glutamate synthase [NADPH] large chain Bacillus subtilis (strain 168)
Q43155 9.75e-130 414 45 8 475 1 FdGOGAT Ferredoxin-dependent glutamate synthase, chloroplastic Spinacia oleracea
Q05755 3.04e-129 411 48 3 452 1 gltB Glutamate synthase [NADPH] large chain Azospirillum brasilense
Q9T0P4 5.84e-129 412 47 9 461 1 GLU2 Ferredoxin-dependent glutamate synthase 2, chloroplastic Arabidopsis thaliana
Q1XDB2 1.68e-128 410 47 4 452 3 gltB Ferredoxin-dependent glutamate synthase Neopyropia yezoensis
P23225 1.72e-128 410 47 8 461 1 GLSF Ferredoxin-dependent glutamate synthase, chloroplastic Zea mays
Q69RJ0 2.07e-128 410 47 8 461 2 GLU Ferredoxin-dependent glutamate synthase, chloroplastic Oryza sativa subsp. japonica
P51375 6.41e-128 408 46 6 453 3 gltB Ferredoxin-dependent glutamate synthase Porphyra purpurea
Q06434 1.72e-124 399 45 4 460 3 gltB Ferredoxin-dependent glutamate synthase Antithamnion sp.
Q9C102 1.88e-124 402 46 4 454 1 glt1 Glutamate synthase [NADH] Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P55037 3.5e-124 398 45 6 456 1 gltB Ferredoxin-dependent glutamate synthase 1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9ZNZ7 4.28e-124 399 46 8 461 1 GLU1 Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial Arabidopsis thaliana
P96218 5.19e-121 389 46 10 468 1 gltB Glutamate synthase [NADPH] large chain Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q03460 7.07e-121 392 45 6 460 1 None Glutamate synthase [NADH], amyloplastic Medicago sativa
Q0JKD0 3.04e-120 390 45 6 458 2 Os01g0681900 Glutamate synthase 1 [NADH], chloroplastic Oryza sativa subsp. japonica
Q9LV03 3.46e-118 385 44 6 472 1 GLT1 Glutamate synthase 1 [NADH], chloroplastic Arabidopsis thaliana
O19906 3.88e-118 382 46 5 455 3 gltB Ferredoxin-dependent glutamate synthase Cyanidium caldarium
Q0DG35 1.59e-117 383 44 6 463 2 Os05g0555600 Glutamate synthase 2 [NADH], chloroplastic Oryza sativa subsp. japonica
Q12680 1.96e-103 342 41 6 454 1 GLT1 Glutamate synthase [NADH] Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
B9KBQ2 1.74e-23 106 36 1 158 3 gltB Archaeal-type glutamate synthase [NADPH] Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E)
B1L993 2.28e-22 103 35 1 156 3 gltB Archaeal-type glutamate synthase [NADPH] Thermotoga sp. (strain RQ2)
Q9WYM8 2.28e-22 103 35 1 156 3 gltB Archaeal-type glutamate synthase [NADPH] Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q58746 3.2e-22 102 34 2 173 3 MJ1351 Archaeal glutamate synthase [NADPH] Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O29309 4.03e-21 99 35 1 158 3 gltB Archaeal glutamate synthase [NADPH] Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q3Z7F6 1.64e-19 94 34 2 171 3 gltB Archaeal-type glutamate synthase [NADPH] Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)
O34849 2.08e-11 69 37 0 110 3 yerD Glutamate synthase large subunit-like protein YerD Bacillus subtilis (strain 168)
O87392 2.47e-09 62 28 3 165 3 glxD Glutamate synthase large subunit-like protein Rhizobium meliloti (strain 1021)
P0CW43 0.000696 45 24 9 210 3 fwdC Tungsten-containing formylmethanofuran dehydrogenase 2 subunit C Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_03640
Feature type CDS
Gene -
Product Glutamate synthase [NADPH] large chain
Location 46034 - 47458 (strand: 1)
Length 1425 (nucleotides) / 474 (amino acids)

Contig

Accession ZDB_681
Length 269562 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3223
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01493 GXGXG motif
PF01645 Conserved region in glutamate synthase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0070 Amino acid transport and metabolism (E) E Glutamate synthase domain 3

Protein Sequence

MAKAYADFITISGYDGGTGASPLTSVKYAGTPWELGLAEAQQALVSNGLRHKIRLQTDGGLKTGLDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDETLRRDHYHGLPERVMNYFRFIAQETRELMAQLGVRKLTDLIGRTDLLVRIEGTTARQQKLDLSDLLVSPVPHEGAALFCSQTNPPFDKGELNRRILEDTRTCVQTQQSRAFYYDIRNTDRSVGAALSGFVAELYGNSGIAASPLKLHFTGTAGQSFGVWNAAGIELTLTGDANDYVGKGMAGGQIVLHPHPGSAFAAHDTTIAGNTCLYGATGGKLYAAGRAGERFAVRNSGALAVVEGVGDNGCEYMTGGIVCVLGKTGINFAAGMTGGFAYLYDEDGTAAGRVNPEMAETRDISGLPVLQEHLRGMLEDHRRLTGSARADALLRDWTEQAGRFILVKPKSADIHALAGVTRHADTELRIRAQ

Flanking regions ( +/- flanking 50bp)

TTTCCGTCAAACTGGTCTCGTAGCCGGGCGTCGGTACCATTGCCACCGGCGTGGCCAAAGCCTATGCCGATTTCATCACCATTTCGGGATATGACGGCGGCACCGGCGCCAGTCCGCTCACCTCTGTCAAATACGCGGGTACCCCGTGGGAGCTGGGGCTGGCAGAAGCCCAGCAGGCACTGGTGAGCAACGGTCTGCGCCATAAAATCCGCTTACAGACAGACGGCGGACTGAAAACCGGGCTGGATATCATCAAAGCCGCCATTCTCGGCGCGGAGAGCTTCGGTTTCGGCACCGGCCCGATGGTCGCCCTCGGCTGCAAATATCTGCGTATCTGCCACCTGAATAACTGCGCCACCGGCGTGGCAACCCAGGATGAAACGCTGCGCCGCGATCACTATCACGGCCTGCCGGAGCGGGTAATGAACTATTTCCGCTTTATTGCACAGGAAACCCGTGAGCTGATGGCGCAACTGGGTGTGAGAAAACTGACCGATCTTATCGGCCGCACTGATTTGCTGGTCCGGATTGAAGGCACCACCGCCCGGCAGCAGAAACTGGATCTGTCCGATCTGCTGGTATCCCCGGTACCGCATGAAGGTGCCGCCCTGTTCTGTTCACAGACCAATCCGCCGTTTGATAAGGGTGAACTGAACCGCCGCATCCTGGAAGATACCCGGACCTGTGTGCAGACACAGCAATCCCGTGCCTTTTATTATGATATCCGCAATACCGACCGCTCGGTGGGTGCTGCGCTCTCCGGCTTTGTGGCAGAGCTGTACGGCAACAGCGGGATCGCCGCTTCGCCGCTGAAACTGCATTTTACCGGCACCGCCGGGCAGAGTTTCGGGGTCTGGAATGCCGCCGGGATTGAACTGACGCTCACGGGCGATGCCAACGACTATGTCGGTAAAGGCATGGCGGGCGGGCAGATTGTTCTGCATCCGCATCCGGGTTCTGCCTTTGCCGCTCACGACACCACAATTGCCGGAAATACCTGTCTGTATGGTGCCACCGGCGGCAAACTCTACGCCGCAGGCCGTGCCGGAGAGCGCTTTGCTGTCCGTAACTCCGGCGCACTGGCGGTGGTCGAAGGCGTCGGTGATAACGGCTGTGAATATATGACCGGCGGGATTGTCTGTGTGCTCGGCAAAACCGGAATTAACTTCGCGGCCGGGATGACCGGCGGATTCGCTTATCTCTATGATGAGGACGGCACCGCCGCCGGACGTGTCAATCCTGAAATGGCGGAAACCCGCGATATCAGCGGGCTGCCGGTTCTGCAGGAACATTTGCGCGGTATGCTGGAAGACCACCGCCGCCTGACCGGTTCCGCCAGAGCAGACGCACTTCTCAGAGATTGGACAGAGCAGGCCGGGCGGTTTATCCTCGTCAAGCCGAAATCTGCGGATATTCATGCACTTGCCGGGGTAACCCGCCACGCAGACACTGAATTACGGATCCGGGCACAGTAAGGAGAATTAAGATGAGCCGCAATGTTTATCAGTTTATTGAATTACAGCGT