Orthogroup:group_3223


Homologs in group_3223

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03105 FBDBKF_03105 Morganella morganii S1 - Glutamate synthase [NADPH] large chain
EHELCC_07430 EHELCC_07430 Morganella morganii S2 - Glutamate synthase [NADPH] large chain
NLDBIP_07755 NLDBIP_07755 Morganella morganii S4 - Glutamate synthase [NADPH] large chain
LHKJJB_07290 LHKJJB_07290 Morganella morganii S3 - Glutamate synthase [NADPH] large chain
HKOGLL_03640 HKOGLL_03640 Morganella morganii S5 - Glutamate synthase [NADPH] large chain

Distribution of group_3223 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3223 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3223

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3223.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5

Product

# Product Occurence
1 Glutamate synthase [NADPH] large chain 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0070 5 E Amino acid transport and metabolism (E) Glutamate synthase domain 3

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01493 5 GXGXG motif
PF01645 5 Conserved region in glutamate synthase

Annotations of the 31 SwissProt hits

Annotation Number of occurrences
Archaeal glutamate synthase [NADPH] 2
Archaeal-type glutamate synthase [NADPH] 4
Ferredoxin-dependent glutamate synthase 4
Ferredoxin-dependent glutamate synthase 1 1
Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial 1
Ferredoxin-dependent glutamate synthase 2 1
Ferredoxin-dependent glutamate synthase 2, chloroplastic 1
Ferredoxin-dependent glutamate synthase, chloroplastic 3
Glutamate synthase 1 [NADH], chloroplastic 2
Glutamate synthase 2 [NADH], chloroplastic 1
Glutamate synthase [NADH] 2
Glutamate synthase [NADH], amyloplastic 1
Glutamate synthase [NADPH] large chain 5
Glutamate synthase large subunit-like protein 1
Glutamate synthase large subunit-like protein YerD 1
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit C 1

Protein length

Unique protein length 474

Protein length distribution