Homologs in group_2552

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02550 FBDBKF_02550 100.0 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_03020 EHELCC_03020 100.0 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_00440 NLDBIP_00440 100.0 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_01595 LHKJJB_01595 100.0 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS04975 F4V73_RS04975 79.8 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_2552

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2552

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P67430 4.16e-101 293 72 0 197 1 nemR HTH-type transcriptional repressor NemR Escherichia coli (strain K12)
P67431 4.16e-101 293 72 0 197 3 nemR HTH-type transcriptional repressor NemR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q9RAJ1 4.27e-19 84 27 2 191 4 dhaR HTH-type transcriptional repressor DhaR Mycobacterium sp. (strain GP1)
Q3J6K8 1.34e-17 80 32 2 176 1 acuR Transcriptional regulator AcuR Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
P42097 5.07e-07 51 23 2 147 4 None Uncharacterized HTH-type transcriptional regulator in lacX 3'region Lactococcus lactis subsp. lactis
P42105 1.61e-05 47 45 0 42 1 yxaF Uncharacterized HTH-type transcriptional regulator YxaF Bacillus subtilis (strain 168)
P40950 2.56e-05 47 29 1 86 4 yuxN Uncharacterized HTH-type transcriptional regulator YuxN Bacillus subtilis (strain 168)
O34619 4.11e-05 45 25 6 183 4 lmrA HTH-type transcriptional regulator LmrA Bacillus subtilis (strain 168)
Q9RMY4 4.17e-05 45 22 4 174 4 pXO2-48 Uncharacterized HTH-type transcriptional regulator pXO2-48/BXB0055/GBAA_pXO2_0055 Bacillus anthracis
P9WMC1 0.000341 43 41 1 56 1 ethR HTH-type transcriptional regulator EthR Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMC0 0.000341 43 41 1 56 1 ethR HTH-type transcriptional regulator EthR Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q7TVI1 0.000341 43 41 1 56 1 ethR HTH-type transcriptional regulator EthR Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9AIU0 0.000351 43 24 6 170 1 ttgR HTH-type transcriptional regulator TtgR Pseudomonas putida (strain DOT-T1E)
P0ACT1 0.000376 43 37 1 56 3 acrR HTH-type transcriptional regulator AcrR Shigella flexneri
P0ACS9 0.000376 43 37 1 56 1 acrR HTH-type transcriptional regulator AcrR Escherichia coli (strain K12)
P0ACT0 0.000376 43 37 1 56 3 acrR HTH-type transcriptional regulator AcrR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01635
Feature type CDS
Gene acrR
Product DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
Location 314094 - 314690 (strand: -1)
Length 597 (nucleotides) / 198 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2552
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family
PF16925 Tetracyclin repressor-like, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K16137 TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon - -

Protein Sequence

MNKHTEHDTREHLLATGERLCLQRGFTGMGLSELLKTAGVPKGSFYHYFRSKELFGVALLERYYEDYLERLTGHFEHGPGNYRDRFLAYYGDILKNACQHSRIQGCLTVKLSAEVCDLSEDMNAAMDKGVSKVIALLAQTLESGRKENSLMFQGDAQHAAQVFYSLWLGANLQAKISRSTAPLESALAHVETLITAPE

Flanking regions ( +/- flanking 50bp)

TTGTTTTAAATAAACTTGCAACAGACCGGTCGGTCTATTAAAGTATTGTCATGAACAAACACACTGAACATGATACCCGCGAACATCTTCTGGCTACCGGCGAACGCCTGTGTCTTCAGCGCGGCTTTACCGGCATGGGGCTGAGTGAGCTGCTGAAAACGGCCGGGGTGCCGAAGGGCTCGTTTTATCACTATTTTCGCTCCAAGGAATTATTCGGCGTAGCTCTGCTGGAACGCTATTACGAAGATTACCTGGAACGCCTGACCGGTCATTTTGAGCACGGCCCCGGGAATTACCGTGATCGCTTTCTCGCGTATTACGGCGATATTCTGAAAAATGCCTGTCAGCACAGCCGTATTCAGGGCTGTCTGACGGTCAAATTATCCGCCGAAGTGTGTGATTTATCGGAAGATATGAATGCCGCGATGGATAAGGGCGTCAGTAAAGTGATCGCACTGCTGGCGCAAACCCTGGAAAGCGGAAGGAAAGAAAATTCGCTGATGTTTCAGGGCGATGCGCAGCACGCCGCACAGGTATTTTATTCATTATGGCTGGGGGCAAATTTGCAGGCAAAAATTTCCCGCAGTACCGCGCCGCTGGAAAGTGCACTGGCGCATGTTGAAACACTGATTACCGCGCCTGAGTAATTTTTTCGCAGGCGTTTTTATTTATCTGAAAACTAGTCGACTGGTCTAAT