Orthogroup:group_2552



Homologs in group_2552

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02550 FBDBKF_02550 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
EHELCC_03020 EHELCC_03020 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_00440 NLDBIP_00440 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_01595 LHKJJB_01595 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_01635 HKOGLL_01635 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS04975 F4V73_RS04975 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of group_2552 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2552 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2552

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2552.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrR 5
2 - 1

Product

# Product Occurence
1 DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA 5
2 TetR/AcrR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 6 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K16137 6 TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 6 Bacterial regulatory proteins, tetR family
PF16925 6 Tetracyclin repressor-like, C-terminal domain

Annotations of the 17 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator AcrR 3
HTH-type transcriptional regulator EthR 3
HTH-type transcriptional regulator LmrA 1
HTH-type transcriptional regulator MtrR 1
HTH-type transcriptional regulator TtgR 1
HTH-type transcriptional repressor DhaR 1
HTH-type transcriptional repressor NemR 2
Transcriptional regulator AcuR 1
Uncharacterized HTH-type transcriptional regulator YuxN 1
Uncharacterized HTH-type transcriptional regulator YxaF 1
Uncharacterized HTH-type transcriptional regulator in lacX 3'region 1
Uncharacterized HTH-type transcriptional regulator pXO2-48/BXB0055/GBAA_pXO2_0055 1

Protein length

Min length 198
Max length 199
Mean length (sd) 198.2 (0.4)
Median length 198.0

Protein length distribution