Homologs in group_574

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01605 FBDBKF_01605 100.0 Morganella morganii S1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase
EHELCC_02075 EHELCC_02075 100.0 Morganella morganii S2 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase
NLDBIP_01385 NLDBIP_01385 100.0 Morganella morganii S4 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase
LHKJJB_00650 LHKJJB_00650 100.0 Morganella morganii S3 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase
F4V73_RS03945 F4V73_RS03945 89.3 Morganella psychrotolerans rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase
PMI_RS07855 PMI_RS07855 63.3 Proteus mirabilis HI4320 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase

Distribution of the homologs in the orthogroup group_574

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_574

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P36999 9.14e-119 343 59 1 269 1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Escherichia coli (strain K12)
P42313 5.69e-26 106 30 9 252 3 yxjB Putative 23S rRNA (guanine-N(1)-)-methyltransferase YxjB Bacillus subtilis (strain 168)
Q9S1M6 1.53e-25 105 33 8 244 1 rlmAII 23S rRNA (guanine(748)-N(1))-methyltransferase Streptomyces fradiae
P37000 2.63e-20 91 28 7 265 3 myrA Putative 23S rRNA (guanine-N(1)-)-methyltransferase Micromonospora griseorubida
B1HTA6 3.13e-09 59 33 5 120 3 menG Demethylmenaquinone methyltransferase Lysinibacillus sphaericus (strain C3-41)
A8FEK9 3.26e-09 59 33 5 124 3 menG Demethylmenaquinone methyltransferase Bacillus pumilus (strain SAFR-032)
B3PI89 4.86e-09 60 33 4 127 3 bioC Biotin biosynthesis bifunctional protein BioHC Cellvibrio japonicus (strain Ueda107)
Q73AY2 3.07e-08 56 37 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain ATCC 10987 / NRS 248)
A7Z627 3.31e-08 56 33 5 127 3 menG Demethylmenaquinone methyltransferase Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
O86169 4.28e-08 56 29 6 152 3 menG Demethylmenaquinone methyltransferase Geobacillus stearothermophilus
Q65I24 7.58e-08 55 29 6 139 3 menG Demethylmenaquinone methyltransferase Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
Q81FQ6 8.4e-08 55 37 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7HHR7 8.4e-08 55 37 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain B4264)
B7IP91 8.4e-08 55 37 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain G9842)
A1SE26 1.8e-07 54 30 6 153 3 menG Demethylmenaquinone methyltransferase Nocardioides sp. (strain ATCC BAA-499 / JS614)
A0PQX0 2.19e-07 54 31 4 106 3 MUL_2377 Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase 1 Mycobacterium ulcerans (strain Agy99)
Q6HL42 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q63DL9 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain ZK / E33L)
B9IVN5 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain Q1)
B7HL23 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain AH187)
C1EN10 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain 03BB102)
B7JGZ8 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus cereus (strain AH820)
Q81SW0 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus anthracis
C3L8S6 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus anthracis (strain CDC 684 / NRRL 3495)
C3P5A0 2.85e-07 53 36 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus anthracis (strain A0248)
C5D3E5 3.46e-07 53 28 6 152 3 menG Demethylmenaquinone methyltransferase Geobacillus sp. (strain WCH70)
Q5KXU0 5.34e-07 52 28 6 152 3 menG Demethylmenaquinone methyltransferase Geobacillus kaustophilus (strain HTA426)
C5C0T0 6.64e-07 52 30 5 156 3 menG Demethylmenaquinone methyltransferase Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / CCUG 43141 / JCM 11478 / NBRC 16432 / NCIMB 13614 / HKI 0122)
A9VMC2 7.13e-07 52 35 4 104 3 menG Demethylmenaquinone methyltransferase Bacillus mycoides (strain KBAB4)
C5BMZ8 9.52e-07 53 27 4 122 3 bioC Biotin biosynthesis bifunctional protein BioHC Teredinibacter turnerae (strain ATCC 39867 / T7901)
P9WIN3 2.32e-06 51 33 4 98 1 Rv2952 Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIN2 2.32e-06 51 33 4 98 3 MT3026 Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U6W0 2.32e-06 51 33 4 98 3 MRA_2979 Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
A1KMU6 2.32e-06 51 33 4 98 3 BCG_2973 Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase Mycobacterium bovis (strain BCG / Pasteur 1173P2)
Q7TXK3 2.32e-06 51 33 4 98 3 BQ2027_MB2976 Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
A1R990 2.42e-06 51 30 5 133 3 menG Demethylmenaquinone methyltransferase Paenarthrobacter aurescens (strain TC1)
A9WRT1 3e-06 50 31 2 100 3 menG Demethylmenaquinone methyltransferase Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)
Q8KZ94 3.17e-06 50 33 5 120 1 rebM Demethylrebeccamycin-D-glucose O-methyltransferase Lentzea aerocolonigenes
P31113 5.26e-06 50 29 5 127 1 menG Demethylmenaquinone methyltransferase Bacillus subtilis (strain 168)
Q83E64 5.4e-06 50 31 4 129 3 bioC1 Malonyl-[acyl-carrier protein] O-methyltransferase 1 Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Q88SI6 1.06e-05 48 32 6 126 3 menG Demethylmenaquinone methyltransferase Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Q2YY85 1.16e-05 48 27 7 161 3 menG Demethylmenaquinone methyltransferase Staphylococcus aureus (strain bovine RF122 / ET3-1)
A0PQ29 1.29e-05 48 31 4 99 3 MUL_2009 Probable phthiotriol/phenolphthiotriol dimycocerosates methyltransferase 2 Mycobacterium ulcerans (strain Agy99)
P65349 1.39e-05 48 31 3 104 3 BQ2027_MB3374 Uncharacterized methyltransferase Mb3374 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WK01 1.39e-05 48 31 3 104 1 Rv3342 Uncharacterized methyltransferase Rv3342 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WK00 1.39e-05 48 31 3 104 3 MT3445 Uncharacterized methyltransferase MT3445 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A6W0X8 2e-05 48 34 4 106 3 bioC Malonyl-[acyl-carrier protein] O-methyltransferase Marinomonas sp. (strain MWYL1)
A0A0A2IBN3 2.17e-05 48 38 2 81 1 cnsE O-methyltransferase cnsE Penicillium expansum
A0QUV5 2.74e-05 48 33 3 101 1 MSMEG_2350 Probable S-adenosylmethionine-dependent methyltransferase MSMEG_2350/MSMEI_2290 Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
B9DNV5 3.69e-05 47 28 5 124 3 menG Demethylmenaquinone methyltransferase Staphylococcus carnosus (strain TM300)
Q21FY5 6.77e-05 47 29 3 122 3 bioC Biotin biosynthesis bifunctional protein BioHC Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Q9CD86 8.33e-05 46 30 4 98 3 ML0130 Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase Mycobacterium leprae (strain TN)
A6UYW3 9.64e-05 46 29 2 94 3 bioC Malonyl-[acyl-carrier protein] O-methyltransferase Pseudomonas aeruginosa (strain PA7)
P74388 0.000101 46 35 4 100 1 sll0418 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WJZ1 0.000111 46 32 5 129 1 Rv3030 Probable S-adenosylmethionine-dependent methyltransferase Rv3030 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WJZ0 0.000111 46 32 5 129 3 MT3114 Probable S-adenosylmethionine-dependent methyltransferase MT3114 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8KF69 0.00015 45 28 4 116 3 menG Demethylmenaquinone methyltransferase Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
Q6ANL3 0.000154 45 29 4 124 3 ubiE Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Q6ZIX2 0.00017 45 36 5 99 2 Smt1-1 Cycloartenol-C-24-methyltransferase 1 Oryza sativa subsp. japonica
B3QLI9 0.000246 45 26 3 119 3 menG Demethylmenaquinone methyltransferase Chlorobaculum parvum (strain DSM 263 / NCIMB 8327)
A8FKB3 0.000263 45 26 2 108 3 ubiE Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)
B0RCZ0 0.000354 44 29 5 147 3 menG Demethylmenaquinone methyltransferase Clavibacter sepedonicus
Q9RX93 0.000465 44 28 7 160 3 tam Trans-aconitate 2-methyltransferase Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
D2T333 0.000519 44 28 3 128 3 bioC Malonyl-[acyl-carrier protein] O-methyltransferase Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96)
Q4W9V1 0.000536 44 32 6 122 1 erg6 Sterol 24-C-methyltransferase erg6 Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_00690
Feature type CDS
Gene rlmA
Product 23S rRNA (guanine(745)-N(1))-methyltransferase
Location 120828 - 121643 (strand: 1)
Length 816 (nucleotides) / 271 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_574
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13649 Methyltransferase domain
PF21302 RlmA, N-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2226 Coenzyme transport and metabolism (H) H Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00563 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] - -

Protein Sequence

MSYQCPLCQHPLTHRSGSYSCENHHQFDLAKEGYINLLPVQFKRSKEPGDSKEMMQARRAFLDNHHYRPMRDQVIAAFEQHLPAQAEQVLDIGCGEGYYTGALAESLAARQVTVYGLDVAKVAVRYGAKRYPQVSFSVASSQRLPFEDNSLDGVLRIYAPCNPDELTRVVKPGGIVITVTPGPRHLYQLKSLIYDEVHLHPLKEEHFPGFGPAQEQQVAYPMLLNGADALALLSMTPFAWKATEAVKHQLAAETAFSCETDFLIRVYRREA

Flanking regions ( +/- flanking 50bp)

GCACAGGCCGTTGCCGGTTGCACCCTTACATTATTTCACAGTGAATGATTATGTCTTACCAATGTCCGCTTTGCCAGCACCCGCTGACGCACCGCTCCGGCAGTTACAGCTGCGAAAACCACCATCAGTTTGATCTCGCGAAAGAGGGGTATATCAATCTCCTGCCTGTCCAGTTCAAGCGCTCGAAAGAGCCGGGTGACAGTAAAGAGATGATGCAGGCGCGCCGGGCATTTCTGGATAATCACCATTACCGCCCTATGCGGGATCAGGTAATCGCGGCATTTGAACAGCATTTACCGGCACAGGCGGAGCAGGTACTGGATATCGGCTGCGGCGAGGGGTACTACACCGGGGCACTGGCGGAAAGCCTTGCGGCACGGCAGGTGACGGTGTACGGGCTGGATGTGGCGAAGGTTGCTGTCCGCTACGGCGCAAAACGCTATCCACAGGTCAGCTTCAGTGTGGCATCCAGCCAGCGGCTGCCGTTTGAGGATAACAGTCTGGATGGGGTGCTGCGGATCTATGCGCCGTGTAATCCGGATGAGTTAACCCGTGTGGTGAAACCGGGCGGCATTGTGATTACCGTGACCCCGGGGCCCCGTCATCTGTATCAGCTGAAATCTCTTATTTATGATGAAGTTCATCTGCACCCGCTGAAGGAAGAGCATTTCCCGGGATTCGGTCCGGCGCAAGAGCAGCAGGTGGCTTACCCGATGCTGCTGAACGGTGCGGACGCACTCGCGCTGCTTTCAATGACACCGTTTGCCTGGAAAGCGACAGAGGCTGTGAAACATCAGTTGGCAGCAGAAACCGCCTTTTCCTGCGAAACAGATTTTCTGATCCGGGTTTACCGCCGGGAAGCCTGATTCAGAAACAAAAAGACCCGCCGGAGCGGGTCATCAGAAGTGATTAAGCG