Homologs in group_2346

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_18690 EHELCC_18690 100.0 Morganella morganii S2 bamA Outer membrane protein assembly factor BamA
NLDBIP_18615 NLDBIP_18615 100.0 Morganella morganii S4 bamA Outer membrane protein assembly factor BamA
LHKJJB_18560 LHKJJB_18560 100.0 Morganella morganii S3 bamA Outer membrane protein assembly factor BamA
HKOGLL_18295 HKOGLL_18295 100.0 Morganella morganii S5 bamA Outer membrane protein assembly factor BamA
F4V73_RS13855 F4V73_RS13855 86.1 Morganella psychrotolerans - BamA/TamA family outer membrane protein
PMI_RS13130 PMI_RS13130 68.9 Proteus mirabilis HI4320 - BamA/TamA family outer membrane protein

Distribution of the homologs in the orthogroup group_2346

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2346

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_18945
Feature type CDS
Gene bamA
Product Outer membrane protein assembly factor BamA
Location 5102 - 6244 (strand: -1)
Length 1143 (nucleotides) / 380 (amino acids)

Contig

Accession contig_37
Length 25512 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2346
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01103 Omp85 superfamily domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4775 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein assembly factor BamA

Protein Sequence

MIFRYFAAGLAFTSLVAVHTAKAGYLPSREQIDDALSGLGSNNQFDRSKTIDWGVLPGPFYTPELELGVGVALVGMYQADSDPDSKISTLSLSGFASSTGAFGLNLNNYTYLDNDNWRFYLSGTINNVPTDYWGKGYQAGRVKDHFGEYKSQQLRLTPSLLRRVADNTYIGLGWDFSTLNAASPDKPFSRYMDEHDYDRHTVSSGVSATFSYDSRDFLPNARQGQALDLRYTWYAPSLGSDTRFNTTEIQYNYYYPLDEKTVLAFDNYARFASGDVPWDQYSRLGNGRQMRGYYDGRYQDNHVFASQVEYRRKLDWRHGIVLWAGGGTMSESARHLGGGHWLPNVGVGYRFEFKPRMNVRLDFGVGKQSSGFYFQVGEAF

Flanking regions ( +/- flanking 50bp)

GGTTTTAATAACCGTAACAGTTTCTTTATTTCCGGAGAATTCCGTTTTTAATGATATTTCGTTATTTTGCCGCCGGGCTGGCATTTACCAGTCTGGTGGCGGTTCACACAGCAAAGGCCGGTTATTTACCCTCACGGGAACAAATTGATGATGCACTGTCCGGACTGGGCAGTAATAACCAGTTTGACCGCAGCAAAACCATCGACTGGGGGGTATTACCCGGGCCGTTTTATACCCCTGAACTGGAATTGGGTGTCGGGGTGGCGCTGGTCGGCATGTATCAGGCGGACAGTGATCCTGACAGTAAAATATCCACCTTATCCCTCAGTGGTTTTGCCTCCTCAACCGGGGCGTTCGGGCTGAACCTGAATAATTACACCTATCTGGATAATGATAACTGGCGTTTTTATCTCAGCGGCACGATCAATAATGTGCCGACGGATTACTGGGGGAAAGGCTATCAGGCTGGGCGTGTCAAAGATCATTTCGGTGAATATAAGTCACAGCAACTGCGGCTGACGCCGTCACTGCTGCGCCGGGTGGCGGATAATACCTATATCGGGTTAGGCTGGGATTTCAGCACACTGAATGCGGCCTCGCCGGATAAACCATTCAGCCGCTATATGGATGAGCATGATTATGACCGGCATACGGTCAGTTCCGGGGTCAGCGCCACCTTCAGTTATGACAGCCGGGATTTCCTGCCGAATGCCCGTCAGGGGCAGGCGCTGGATCTGCGTTATACCTGGTATGCGCCGTCACTCGGCAGTGATACGCGGTTTAATACCACCGAGATTCAGTACAACTATTATTATCCGCTGGATGAAAAAACGGTGCTGGCGTTTGATAACTACGCGCGCTTTGCCTCCGGAGATGTGCCGTGGGATCAGTATTCCCGCCTCGGTAACGGGCGGCAGATGCGCGGCTATTATGACGGCCGCTATCAGGATAATCATGTCTTTGCCTCACAGGTGGAGTACCGGCGCAAGCTGGACTGGCGGCACGGTATTGTGCTCTGGGCCGGCGGCGGGACGATGAGTGAGAGTGCACGTCATCTCGGCGGCGGTCACTGGCTGCCGAACGTCGGTGTGGGGTATCGTTTTGAATTCAAACCCCGGATGAATGTGCGGCTCGATTTTGGTGTCGGGAAACAGAGCAGCGGTTTTTATTTCCAGGTCGGGGAAGCCTTCTGATGCGGGTATTTATCAGCGCAATTATCATGATGGTACTGTTATCCGGCTGT