Homologs in group_3062

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_18355 EHELCC_18355 100.0 Morganella morganii S2 - STM0539 family protein
NLDBIP_18280 NLDBIP_18280 100.0 Morganella morganii S4 - STM0539 family protein
LHKJJB_18475 LHKJJB_18475 100.0 Morganella morganii S3 - STM0539 family protein
HKOGLL_18210 HKOGLL_18210 100.0 Morganella morganii S5 - STM0539 family protein
F4V73_RS01830 F4V73_RS01830 80.1 Morganella psychrotolerans - STM0539 family protein

Distribution of the homologs in the orthogroup group_3062

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3062

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_18320
Feature type CDS
Gene -
Product STM0539 family protein
Location 28294 - 28734 (strand: -1)
Length 441 (nucleotides) / 146 (amino acids)

Contig

Accession contig_33
Length 35117 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3062
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MNKFIFPAIVCAATLVTLPANAGKLPDNPYLSTAVLSSAGSVYSSVMISGAILSPIILPAQMSAESVENNKKEKVTTITGKTDKNEDVALLVATEKLEKTPVNPGDKLTLEPAEKGPGAYLKKDGKIISHMVTQDDRELTHQEKMP

Flanking regions ( +/- flanking 50bp)

TGTCTGAACGGGTAAAAAGAACATTTGTTCATTAATTTAAGGGAAACAGCATGAATAAGTTTATTTTTCCGGCCATCGTTTGTGCCGCCACACTGGTCACACTGCCTGCGAATGCAGGTAAACTGCCGGATAATCCTTATTTATCGACTGCGGTACTCAGTAGTGCGGGCAGTGTCTACAGCTCTGTGATGATAAGCGGCGCGATTTTATCGCCGATCATTTTACCGGCTCAGATGAGTGCGGAGTCTGTGGAAAATAATAAGAAAGAAAAAGTCACCACCATCACCGGCAAGACCGATAAAAATGAAGATGTGGCCCTGCTGGTCGCCACTGAAAAACTGGAGAAAACCCCGGTGAATCCGGGTGATAAACTGACACTGGAACCGGCCGAAAAAGGCCCCGGTGCGTATCTGAAAAAGGACGGGAAAATCATTTCCCATATGGTAACTCAGGATGATCGTGAATTAACCCATCAGGAGAAGATGCCATAATATGCGACTGCTGAAATCCGTTTTTGCGGCTGCCCTGCTCACTGCGTCCG