Homologs in group_3062

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18320 FBDBKF_18320 80.1 Morganella morganii S1 - STM0539 family protein
EHELCC_18355 EHELCC_18355 80.1 Morganella morganii S2 - STM0539 family protein
NLDBIP_18280 NLDBIP_18280 80.1 Morganella morganii S4 - STM0539 family protein
LHKJJB_18475 LHKJJB_18475 80.1 Morganella morganii S3 - STM0539 family protein
HKOGLL_18210 HKOGLL_18210 80.1 Morganella morganii S5 - STM0539 family protein

Distribution of the homologs in the orthogroup group_3062

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3062

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01830
Feature type CDS
Gene -
Product STM0539 family protein
Location 401441 - 401881 (strand: -1)
Length 441 (nucleotides) / 146 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3062
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MNRFIFPAVICAASFISLPSYAWNIPTNPSLSTMVLSSAGSAYSSVVISGAILSPIILPAQLIAESVENNKKEKVTTITAKTAKKEDVTLLVATEKLEENPVKPGDKLTIEPAEKGAGAYLKKDGKVISHMVTQDDRELTHQEKMP

Flanking regions ( +/- flanking 50bp)

GGGTCTCTGAACGCGGGAAGAAAACATTTATTCATTAATAAGGAAACAGCATGAACAGGTTTATTTTTCCGGCTGTGATATGTGCAGCTTCATTCATTTCCTTACCGTCCTATGCGTGGAATATACCGACAAATCCTTCTTTATCGACTATGGTACTCAGCAGCGCCGGTAGTGCCTACAGCTCAGTTGTGATAAGCGGAGCCATTTTATCCCCTATTATTTTGCCTGCTCAGTTGATTGCTGAATCAGTGGAAAATAATAAAAAAGAAAAAGTGACCACTATTACGGCTAAAACCGCGAAAAAAGAGGATGTCACTCTGTTGGTTGCAACCGAAAAACTGGAAGAAAACCCGGTAAAACCCGGTGATAAGCTCACTATTGAGCCTGCGGAAAAAGGTGCCGGTGCGTATCTGAAAAAAGACGGAAAAGTCATTTCCCACATGGTGACACAAGACGACCGTGAATTAACCCATCAGGAGAAAATGCCATAATATGCGCCTGCTGAAATCAGTGATCCTGACCGTCCTGCTCATTATATCCG