Homologs in group_3062

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18320 FBDBKF_18320 100.0 Morganella morganii S1 - STM0539 family protein
NLDBIP_18280 NLDBIP_18280 100.0 Morganella morganii S4 - STM0539 family protein
LHKJJB_18475 LHKJJB_18475 100.0 Morganella morganii S3 - STM0539 family protein
HKOGLL_18210 HKOGLL_18210 100.0 Morganella morganii S5 - STM0539 family protein
F4V73_RS01830 F4V73_RS01830 80.1 Morganella psychrotolerans - STM0539 family protein

Distribution of the homologs in the orthogroup group_3062

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3062

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_18355
Feature type CDS
Gene -
Product STM0539 family protein
Location 28167 - 28607 (strand: -1)
Length 441 (nucleotides) / 146 (amino acids)

Contig

Accession ZDB_236
Length 34990 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3062
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MNKFIFPAIVCAATLVTLPANAGKLPDNPYLSTAVLSSAGSVYSSVMISGAILSPIILPAQMSAESVENNKKEKVTTITGKTDKNEDVALLVATEKLEKTPVNPGDKLTLEPAEKGPGAYLKKDGKIISHMVTQDDRELTHQEKMP

Flanking regions ( +/- flanking 50bp)

TGTCTGAACGGGTAAAAAGAACATTTGTTCATTAATTTAAGGGAAACAGCATGAATAAGTTTATTTTTCCGGCCATCGTTTGTGCCGCCACACTGGTCACACTGCCTGCGAATGCAGGTAAACTGCCGGATAATCCTTATTTATCGACTGCGGTACTCAGTAGTGCGGGCAGTGTCTACAGCTCTGTGATGATAAGCGGCGCGATTTTATCGCCGATCATTTTACCGGCTCAGATGAGTGCGGAGTCTGTGGAAAATAATAAGAAAGAAAAAGTCACCACCATCACCGGCAAGACCGATAAAAATGAAGATGTGGCCCTGCTGGTCGCCACTGAAAAACTGGAGAAAACCCCGGTGAATCCGGGTGATAAACTGACACTGGAACCGGCCGAAAAAGGCCCCGGTGCGTATCTGAAAAAGGACGGGAAAATCATTTCCCATATGGTAACTCAGGATGATCGTGAATTAACCCATCAGGAGAAGATGCCATAATATGCGACTGCTGAAATCCGTTTTTGCGGCTGCCCTGCTCACTGCGTCCG