Homologs in group_1878

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6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_08235 EHELCC_08235 100.0 Morganella morganii S2 - Fumarase D
NLDBIP_08560 NLDBIP_08560 100.0 Morganella morganii S4 - Fumarase D
LHKJJB_05705 LHKJJB_05705 100.0 Morganella morganii S3 - Fumarase D
HKOGLL_05210 HKOGLL_05210 100.0 Morganella morganii S5 - Fumarase D
F4V73_RS02895 F4V73_RS02895 95.5 Morganella psychrotolerans - hypothetical protein
F4V73_RS06260 F4V73_RS06260 36.5 Morganella psychrotolerans - DUF2767 family protein

Distribution of the homologs in the orthogroup group_1878

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1878

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_14045
Feature type CDS
Gene -
Product Fumarase D
Location 1074 - 1274 (strand: -1)
Length 201 (nucleotides) / 66 (amino acids)

Contig

Accession contig_18
Length 100673 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1878
Orthogroup size 7
N. genomes 6

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Genomic region

Protein Sequence

MISERVSDAYVYGEICQAIGRAAVLLCKSGEPVTKEAIQVMLEIYWEQQNDDFMNVIYEKAINALD

Flanking regions ( +/- flanking 50bp)

TAATTAAAGACGGAAAGGCAGTAGTTATATTAAAATAAATAGGCACAAATATGATTTCAGAACGAGTTAGCGACGCATATGTTTATGGCGAAATTTGCCAGGCAATCGGCAGAGCCGCTGTCCTTTTATGCAAAAGTGGCGAGCCGGTTACTAAAGAAGCCATTCAGGTGATGCTGGAAATATATTGGGAACAGCAGAATGATGACTTTATGAATGTCATCTATGAAAAAGCCATCAATGCACTGGACTGATTGTTATCAGCCATTATTCTCAATAAAGGAGAACTCAGCCGCATAATCCC