Homologs in group_1878

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14045 FBDBKF_14045 95.5 Morganella morganii S1 - Fumarase D
EHELCC_08235 EHELCC_08235 95.5 Morganella morganii S2 - Fumarase D
NLDBIP_08560 NLDBIP_08560 95.5 Morganella morganii S4 - Fumarase D
LHKJJB_05705 LHKJJB_05705 95.5 Morganella morganii S3 - Fumarase D
HKOGLL_05210 HKOGLL_05210 95.5 Morganella morganii S5 - Fumarase D
F4V73_RS06260 F4V73_RS06260 39.7 Morganella psychrotolerans - DUF2767 family protein

Distribution of the homologs in the orthogroup group_1878

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1878

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02895
Feature type CDS
Gene -
Product hypothetical protein
Location 615328 - 615528 (strand: 1)
Length 201 (nucleotides) / 66 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1878
Orthogroup size 7
N. genomes 6

Actions

Genomic region

Protein Sequence

MISERVSDAYVYGEICQVIGRAAVLLCKSGEPVTKEAIQVMLEIYSEQQNDDFMNVIYEKAINAMD

Flanking regions ( +/- flanking 50bp)

TACAGGACGGACAGGGGAGTAGTTATATTATAAGACAAATAGGCACAATTATGATTTCAGAACGAGTAAGCGACGCATATGTCTATGGAGAAATTTGCCAGGTAATTGGCAGGGCGGCAGTCCTTTTATGCAAAAGTGGCGAGCCTGTTACCAAAGAAGCCATTCAGGTTATGTTGGAAATATATTCAGAACAACAGAATGATGATTTCATGAATGTAATTTATGAAAAAGCTATCAATGCGATGGATTGATTTTCTGCGTTATTATTTCTGAATGGTGTTACTGTTTTTACTTTTTTCTA