Homologs in group_1858

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_11560 EHELCC_11560 100.0 Morganella morganii S2 citE Citrate lyase beta subunit
NLDBIP_11905 NLDBIP_11905 100.0 Morganella morganii S4 citE Citrate lyase beta subunit
LHKJJB_11765 LHKJJB_11765 100.0 Morganella morganii S3 citE Citrate lyase beta subunit
HKOGLL_10375 HKOGLL_10375 100.0 Morganella morganii S5 citE Citrate lyase beta subunit
F4V73_RS12755 F4V73_RS12755 90.8 Morganella psychrotolerans - HpcH/HpaI aldolase/citrate lyase family protein
PMI_RS11835 PMI_RS11835 71.2 Proteus mirabilis HI4320 - HpcH/HpaI aldolase/citrate lyase family protein

Distribution of the homologs in the orthogroup group_1858

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1858

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13890
Feature type CDS
Gene citE
Product Citrate lyase beta subunit
Location 72266 - 73213 (strand: 1)
Length 948 (nucleotides) / 315 (amino acids)

Contig

Accession contig_17
Length 103646 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1858
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF15617 C-C_Bond_Lyase of the TIM-Barrel fold

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2301 Carbohydrate transport and metabolism (G) G Citrate lyase beta subunit

Protein Sequence

MTRRLSPWNLGASLYMPATRTDITDAIISNKISGLRSLIICLEDAVSEADIPQALENLQGILAALTAEKQRAGNQNWPLVFIRPRHPEMGLWLREHCDLSAVDGLVLPKFTQKTLPVWWLVVKNTPLCMMPTLETEEVCDVVQMRELAQVLKSHPCHDKIIALRIGGNDLMNVISLRRPRHLTLYDGPMGYVIKMLVSVFAPHDFAMTAPVCEHIDDHDVMTRELALDIAHGLVGKTAIHPNQVAVIEQALRVSADEHADALRILNSTQAVFKSQGAMCEPATHRRWASAILARARVYGIAQRKTDGQSFKTQNG

Flanking regions ( +/- flanking 50bp)

GATGCCCTCGGGCAGTACCGCGCCGTCACTATTATCAGGAAGGTATCACCATGACCCGACGTCTCTCCCCGTGGAATTTAGGGGCCTCACTCTATATGCCCGCCACCCGCACCGATATCACGGATGCGATTATCAGTAATAAAATCAGCGGACTGCGTTCACTGATTATTTGTCTGGAAGATGCGGTCAGTGAGGCGGATATCCCGCAGGCACTGGAGAATTTACAGGGCATCCTGGCCGCGCTGACAGCGGAAAAACAGCGTGCCGGAAACCAGAACTGGCCGCTGGTGTTTATCCGTCCGCGTCACCCGGAAATGGGATTGTGGCTGCGCGAGCACTGCGATCTCAGTGCCGTTGACGGGCTGGTGCTGCCTAAGTTCACACAGAAAACGCTGCCGGTCTGGTGGCTGGTGGTGAAAAACACCCCGCTGTGTATGATGCCGACCCTGGAAACAGAAGAAGTCTGTGATGTGGTGCAGATGCGGGAACTGGCGCAGGTACTTAAATCCCATCCCTGCCATGACAAAATCATCGCACTGCGTATCGGCGGCAATGATCTGATGAATGTGATTTCCCTGCGCCGCCCGCGTCATCTCACCCTGTATGACGGCCCGATGGGTTATGTGATTAAAATGCTGGTCTCTGTTTTCGCCCCGCACGATTTCGCCATGACCGCACCGGTCTGCGAGCATATTGATGATCACGATGTCATGACACGGGAACTGGCGCTGGATATCGCTCACGGACTGGTGGGTAAAACGGCTATCCACCCGAATCAGGTGGCAGTGATTGAGCAGGCGCTGCGGGTCTCCGCCGATGAACACGCGGATGCACTGCGGATCCTCAACTCCACACAGGCGGTATTCAAGTCACAGGGGGCTATGTGTGAACCGGCGACACACCGTCGCTGGGCATCCGCTATTCTGGCCCGTGCCCGGGTGTACGGGATCGCACAGCGCAAAACAGACGGACAGTCGTTTAAAACACAAAACGGGTGAAACTGAGAACAGAAATATCATCAGACTGAATATCCTGCACTATTATATCT