Homologs in group_3700
2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product | |
|---|---|---|---|---|---|
| F4V73_RS12560 | F4V73_RS12560 | 79.2 | Morganella psychrotolerans | - | cold shock domain-containing protein |
| PMI_RS14755 | PMI_RS14755 | 71.3 | Proteus mirabilis HI4320 | - | cold shock domain-containing protein |
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|
| Source | Morganella morganii S1 |
|---|---|
| Locus tag | FBDBKF_12480 |
| Feature type | CDS |
| Gene | cspC |
| Product | Cold shock protein, CspA family |
| Location | 14766 - 15245 (strand: -1) |
| Length | 480 (nucleotides) / 159 (amino acids) |
| Accession | contig_15 |
|---|---|
| Length | 114235 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_3700 | |
|---|---|---|
| Orthogroup size | 3 | |
| N. genomes | 3 |
MAMNGTITTWFEDKGFGFIKDENGDNRYFHVVKVANPDLIKKNAAVTFEPGTNNKGLSAYAVKVVPESKYVFIAGERIKLTAIKSFVVYSEEEAADTGIDKENAVLSVGVLMNNIKPKSAGPAEMRTLRKLAITTQHGTTLIFSEDEIDIDETVKMLKV
TTATACTGCGCGCTGTAATGACTCAGCAACAGATGATTAAGCAGGTGGTAATGGCGATGAACGGAACAATCACAACATGGTTTGAAGATAAAGGTTTTGGGTTTATCAAAGATGAGAACGGGGATAACCGTTATTTTCATGTGGTTAAGGTCGCCAATCCTGACCTGATTAAGAAAAATGCCGCCGTGACATTTGAGCCCGGCACCAATAATAAAGGGTTGTCAGCCTATGCGGTAAAAGTAGTGCCGGAAAGCAAATATGTTTTCATCGCCGGTGAGCGTATTAAGCTGACGGCCATTAAGTCCTTCGTGGTTTACAGTGAGGAAGAAGCGGCAGATACCGGGATTGATAAAGAGAATGCAGTCCTGTCTGTCGGCGTACTGATGAACAACATCAAACCAAAATCCGCCGGCCCGGCCGAAATGCGCACACTCAGAAAACTGGCGATCACCACACAGCACGGCACCACCCTGATTTTCTCAGAAGATGAGATAGATATCGATGAAACGGTGAAAATGCTTAAGGTGTGATGATTTTCGAATTACAGGCACAAAAAAAACCAACCATAAGAGGTTGGTTT
