Homologs in group_1472

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_09955 EHELCC_09955 100.0 Morganella morganii S2 ccmA Cytoskeletal protein CcmA, bactofilin family
NLDBIP_10300 NLDBIP_10300 100.0 Morganella morganii S4 ccmA Cytoskeletal protein CcmA, bactofilin family
LHKJJB_11055 LHKJJB_11055 100.0 Morganella morganii S3 ccmA Cytoskeletal protein CcmA, bactofilin family
HKOGLL_14115 HKOGLL_14115 100.0 Morganella morganii S5 ccmA Cytoskeletal protein CcmA, bactofilin family
F4V73_RS10525 F4V73_RS10525 53.8 Morganella psychrotolerans - polymer-forming cytoskeletal protein
PMI_RS09665 PMI_RS09665 37.7 Proteus mirabilis HI4320 - polymer-forming cytoskeletal protein

Distribution of the homologs in the orthogroup group_1472

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1472

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9JMT6 8.24e-05 44 31 0 104 3 yuaD Uncharacterized membrane protein YuaD Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_09455
Feature type CDS
Gene ccmA
Product Cytoskeletal protein CcmA, bactofilin family
Location 119559 - 120029 (strand: -1)
Length 471 (nucleotides) / 156 (amino acids)

Contig

Accession contig_10
Length 146103 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1472
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04519 Polymer-forming cytoskeletal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1664 Cytoskeleton (Z) Z Cytoskeletal protein CcmA, bactofilin family

Protein Sequence

MALFRQDDKKDKAEPMKAEPVKAEPVKNEPAGKSITIVGTGCEITGDMTPGGNIEIYGKVKGNINAGAFKVSVMEKGVIEGDVTAEHVSINGLMMGTCCAKNTEILQKGELNGVCRAEAFSIITGGRFTGQSEPYKSNKVNPDIVVAGKEKTINQK

Flanking regions ( +/- flanking 50bp)

TTTTGCTTCTCTTTGTATTATTTTTCATCACAACAGGAAGGCGTTTTTTTATGGCATTATTCAGACAAGACGATAAAAAAGATAAAGCAGAACCCATGAAAGCGGAACCGGTAAAAGCAGAACCGGTAAAAAATGAACCAGCCGGTAAAAGTATTACTATTGTGGGAACCGGCTGTGAAATAACCGGCGATATGACTCCCGGGGGGAATATTGAAATATACGGGAAAGTGAAAGGGAATATCAATGCCGGGGCTTTTAAAGTTTCCGTTATGGAAAAAGGCGTTATTGAAGGTGATGTGACTGCGGAGCATGTTTCAATCAATGGTCTTATGATGGGCACCTGCTGTGCTAAAAATACGGAAATTTTACAAAAGGGCGAACTTAATGGTGTGTGCCGCGCTGAAGCATTTTCTATTATTACAGGCGGGCGTTTTACCGGCCAGTCCGAACCCTATAAGAGTAATAAAGTAAACCCTGATATCGTTGTTGCCGGTAAAGAAAAGACAATAAATCAAAAATAATCTTTACCCCGGCACACTGTTAACGGATAAAGGAAAAATGAAAATATATT