Homologs in group_67

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09455 FBDBKF_09455 53.8 Morganella morganii S1 ccmA Cytoskeletal protein CcmA, bactofilin family
FBDBKF_10960 FBDBKF_10960 37.2 Morganella morganii S1 - Polymer-forming cytoskeletal protein
EHELCC_05265 EHELCC_05265 37.2 Morganella morganii S2 - Polymer-forming cytoskeletal protein
EHELCC_09955 EHELCC_09955 53.8 Morganella morganii S2 ccmA Cytoskeletal protein CcmA, bactofilin family
NLDBIP_05585 NLDBIP_05585 37.2 Morganella morganii S4 - Polymer-forming cytoskeletal protein
NLDBIP_10300 NLDBIP_10300 53.8 Morganella morganii S4 ccmA Cytoskeletal protein CcmA, bactofilin family
LHKJJB_02465 LHKJJB_02465 37.2 Morganella morganii S3 - Polymer-forming cytoskeletal protein
LHKJJB_11055 LHKJJB_11055 53.8 Morganella morganii S3 ccmA Cytoskeletal protein CcmA, bactofilin family
HKOGLL_14115 HKOGLL_14115 53.8 Morganella morganii S5 ccmA Cytoskeletal protein CcmA, bactofilin family
HKOGLL_15845 HKOGLL_15845 37.2 Morganella morganii S5 - Polymer-forming cytoskeletal protein
F4V73_RS08265 F4V73_RS08265 37.7 Morganella psychrotolerans - polymer-forming cytoskeletal protein
PMI_RS09665 PMI_RS09665 35.2 Proteus mirabilis HI4320 - polymer-forming cytoskeletal protein

Distribution of the homologs in the orthogroup group_67

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_67

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10525
Feature type CDS
Gene -
Product polymer-forming cytoskeletal protein
Location 237029 - 237538 (strand: 1)
Length 510 (nucleotides) / 169 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_67
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF04519 Polymer-forming cytoskeletal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1664 Cytoskeleton (Z) Z Cytoskeletal protein CcmA, bactofilin family

Protein Sequence

MALFKKNNEITREDKIAKTDAADKENVINTADKVVKKVTIIGADCVIQGDIKLDGNIEVYGQIKGNVTSGTFKVSVMDNGSIEGDVIAEHVSINGRLAGVCHARNIEILQKGVLNGVCRAEVFSINTGGVFVGQSEPYVKKVNDLNKEKKSHQDINPVGENNEIKIIKK

Flanking regions ( +/- flanking 50bp)

CTTCATTTTTATTTATGCTGTACTTCACGACGACAGGACAAAAAAAACTCATGGCATTATTCAAAAAAAATAACGAAATCACACGGGAAGATAAAATCGCTAAGACAGACGCTGCAGATAAAGAGAATGTAATAAATACTGCAGATAAAGTCGTTAAGAAAGTAACCATTATTGGTGCAGACTGTGTCATACAAGGTGATATTAAACTCGATGGAAATATTGAAGTATACGGGCAGATAAAAGGAAATGTGACATCCGGAACATTTAAGGTATCAGTGATGGATAATGGCAGTATTGAAGGCGATGTTATTGCTGAGCATGTTTCAATCAATGGCCGGTTAGCCGGTGTATGTCACGCAAGGAATATTGAAATATTACAAAAAGGTGTGCTTAATGGTGTCTGCCGGGCTGAAGTATTTTCAATTAATACCGGAGGTGTTTTTGTCGGACAGTCAGAACCCTATGTGAAAAAGGTAAACGATTTGAATAAAGAAAAGAAATCCCACCAGGACATTAATCCTGTGGGCGAAAATAATGAGATAAAAATTATAAAGAAATAGGGTTCGATGCTATTTTAAGCAACAGGGATGATATAACTGTGAAAAATTAT