Homologs in group_819

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_05400 EHELCC_05400 100.0 Morganella morganii S2 - Inner membrane protein
NLDBIP_05720 NLDBIP_05720 100.0 Morganella morganii S4 - Inner membrane protein
LHKJJB_02600 LHKJJB_02600 100.0 Morganella morganii S3 - Inner membrane protein
HKOGLL_06075 HKOGLL_06075 100.0 Morganella morganii S5 - Inner membrane protein
F4V73_RS08550 F4V73_RS08550 79.3 Morganella psychrotolerans - protein YgfX
PMI_RS09930 PMI_RS09930 47.4 Proteus mirabilis HI4320 - protein YgfX

Distribution of the homologs in the orthogroup group_819

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_819

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46824 8.6e-25 94 38 1 131 1 ygfX Inner membrane protein YgfX Escherichia coli (strain K12)
G4V4G3 5.08e-24 93 43 2 137 1 ygfX Inner membrane protein YgfX Serratia sp. (strain ATCC 39006)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_04110
Feature type CDS
Gene -
Product Inner membrane protein
Location 7359 - 7766 (strand: -1)
Length 408 (nucleotides) / 135 (amino acids)

Contig

Accession contig_4
Length 199551 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_819
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07254 Membrane-bound toxin component of toxin-antitoxin system

Protein Sequence

MVLWKSVLRVSFKTLVFSTLIYGVLALSVLFAPWPGRTSFIWLPLTLLLIAGWGRTQYKISKRAGPASLQNHNRILWRKSEWEITKPPYITRLGIRLHLRSLTSGRQKYLWIASDSVPKEAWSSLNQLLLQYPDI

Flanking regions ( +/- flanking 50bp)

GCCGGACAGCGGGTGCTGTCATTGTGTCTGGATACAGAGGGGGCAGACCGGTGGTTTTATGGAAATCAGTATTACGAGTCTCATTTAAGACTCTGGTCTTCTCAACACTGATTTACGGTGTGCTGGCGCTGAGTGTGTTATTTGCGCCCTGGCCCGGCAGAACCTCATTTATCTGGCTGCCGCTGACACTGCTGCTGATAGCGGGCTGGGGACGGACACAGTATAAAATCAGCAAACGCGCCGGTCCTGCCAGTTTGCAAAACCATAACCGGATTTTGTGGCGCAAAAGTGAATGGGAGATCACCAAACCGCCGTATATTACACGGCTTGGTATCCGTCTGCATCTGCGCTCACTGACCTCCGGGCGGCAGAAATACCTGTGGATAGCCTCTGACAGTGTCCCGAAAGAGGCATGGAGCAGCCTTAATCAGCTGCTTTTACAGTACCCGGATATCTGATCGGCCTACAGCAGTTCCTGAACTTCCTCAAGTACCTGCATACACCATGT