Homologs in group_887

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04110 FBDBKF_04110 79.3 Morganella morganii S1 - Inner membrane protein
EHELCC_05400 EHELCC_05400 79.3 Morganella morganii S2 - Inner membrane protein
NLDBIP_05720 NLDBIP_05720 79.3 Morganella morganii S4 - Inner membrane protein
LHKJJB_02600 LHKJJB_02600 79.3 Morganella morganii S3 - Inner membrane protein
HKOGLL_06075 HKOGLL_06075 79.3 Morganella morganii S5 - Inner membrane protein
PMI_RS09930 PMI_RS09930 47.4 Proteus mirabilis HI4320 - protein YgfX

Distribution of the homologs in the orthogroup group_887

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_887

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46824 1.14e-27 102 38 1 131 1 ygfX Inner membrane protein YgfX Escherichia coli (strain K12)
G4V4G3 3.42e-26 98 39 1 136 1 ygfX Inner membrane protein YgfX Serratia sp. (strain ATCC 39006)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08550
Feature type CDS
Gene -
Product protein YgfX
Location 1765426 - 1765833 (strand: -1)
Length 408 (nucleotides) / 135 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_887
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07254 Membrane-bound toxin component of toxin-antitoxin system

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19168 toxin CptA - -

Protein Sequence

MILWKSVLRVSFKTQVYSTLIYGALAMGLLFAPWPAETSFIWLPVILLIIAGWGRTQHKISKRTGSVSLYNQNRILWRKNEWEIIKPPYITRFGIRLLLRSLASKRQKHLWIASDSLPKEAWHSLNQLLPQYPDI

Flanking regions ( +/- flanking 50bp)

TGCGGCGAATTGCGCTGCTGTTTTTGATGATGACGGAAGGAGCCTGATCGGTGATTTTGTGGAAATCAGTATTACGCGTCTCATTTAAGACACAGGTTTACTCTACACTGATTTATGGTGCGCTTGCGATGGGGCTTTTATTTGCACCGTGGCCGGCTGAAACCTCGTTTATATGGCTGCCGGTTATCCTGCTGATTATTGCCGGATGGGGACGGACGCAACATAAAATCAGTAAGCGGACAGGGTCTGTCAGCCTGTATAATCAAAACCGGATCCTGTGGCGTAAAAATGAGTGGGAGATAATTAAACCCCCCTATATTACCCGGTTTGGTATCCGCCTGCTGTTGCGCTCACTGGCCTCAAAACGGCAAAAACACCTCTGGATTGCCTCTGACAGCCTGCCGAAAGAGGCATGGCACAGTCTTAATCAGCTGCTCCCGCAATATCCTGATATTTAAACTGACGCCGGTTACCGCTTTAATGAATGCTATTTACAGATTAGTGCCAT