Homologs in group_819

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04110 FBDBKF_04110 47.4 Morganella morganii S1 - Inner membrane protein
EHELCC_05400 EHELCC_05400 47.4 Morganella morganii S2 - Inner membrane protein
NLDBIP_05720 NLDBIP_05720 47.4 Morganella morganii S4 - Inner membrane protein
LHKJJB_02600 LHKJJB_02600 47.4 Morganella morganii S3 - Inner membrane protein
HKOGLL_06075 HKOGLL_06075 47.4 Morganella morganii S5 - Inner membrane protein
F4V73_RS08550 F4V73_RS08550 47.4 Morganella psychrotolerans - protein YgfX

Distribution of the homologs in the orthogroup group_819

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_819

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
G4V4G3 2.81e-29 106 38 1 136 1 ygfX Inner membrane protein YgfX Serratia sp. (strain ATCC 39006)
Q46824 4.43e-27 100 38 1 131 1 ygfX Inner membrane protein YgfX Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09930
Feature type CDS
Gene -
Product protein YgfX
Location 2154096 - 2154503 (strand: -1)
Length 408 (nucleotides) / 135 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_819
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07254 Membrane-bound toxin component of toxin-antitoxin system

Protein Sequence

MTLWKSHLTVSWFTQLFSTSVYVIFEIALLLYPWPPGFIYIWVPLLLLLILGWYFSQKNINKRKGDLVLLNGNRIQWKYHEWQIAKQPWISRFGAKITLDSILNNKQITLWVAFDSMPENEWRNFSQLLMQYPDI

Flanking regions ( +/- flanking 50bp)

CGATATCTTGTTGTAATAATAAGATATTAAAGCAGGAGCTAATATCACTCGTGACTTTATGGAAATCACATTTAACAGTTTCTTGGTTTACACAGTTATTTTCAACTAGTGTTTACGTTATTTTTGAAATAGCATTGCTGTTATATCCTTGGCCACCTGGCTTTATTTATATCTGGGTTCCTTTGTTACTTTTACTTATATTAGGTTGGTATTTTAGCCAAAAAAATATCAATAAAAGGAAAGGGGATTTAGTGCTGCTTAATGGCAATCGTATTCAATGGAAATATCATGAATGGCAGATTGCAAAACAACCGTGGATCAGCCGATTTGGTGCAAAAATAACGTTAGATTCTATCTTAAATAATAAGCAAATCACGCTATGGGTTGCTTTTGATAGTATGCCGGAAAATGAGTGGCGAAATTTTTCACAACTGCTGATGCAATACCCAGATATTTAATTCTGGGTATGTATATAAACCGTTAGAATGCTTACTGATTGACTAAGGTT