Homologs in group_712

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_07445 EHELCC_07445 100.0 Morganella morganii S2 elbB isoprenoid biosynthesis glyoxalase ElbB
NLDBIP_07770 NLDBIP_07770 100.0 Morganella morganii S4 elbB isoprenoid biosynthesis glyoxalase ElbB
LHKJJB_07305 LHKJJB_07305 100.0 Morganella morganii S3 elbB isoprenoid biosynthesis glyoxalase ElbB
HKOGLL_03625 HKOGLL_03625 100.0 Morganella morganii S5 elbB isoprenoid biosynthesis glyoxalase ElbB
F4V73_RS11830 F4V73_RS11830 89.4 Morganella psychrotolerans elbB isoprenoid biosynthesis glyoxalase ElbB
PMI_RS18305 PMI_RS18305 64.4 Proteus mirabilis HI4320 elbB isoprenoid biosynthesis glyoxalase ElbB

Distribution of the homologs in the orthogroup group_712

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_712

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABU6 1.31e-97 285 62 0 216 3 elbB Glyoxalase ElbB Shigella flexneri
P0ABU5 1.31e-97 285 62 0 216 1 elbB Glyoxalase ElbB Escherichia coli (strain K12)
P56571 8.69e-58 186 45 3 220 1 None ES1 protein homolog, mitochondrial Rattus norvegicus
Q9D172 1.21e-56 183 45 3 220 1 Gatd3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Mus musculus
A0A0B4J2D5 3.52e-56 182 45 3 220 5 GATD3B Putative glutamine amidotransferase-like class 1 domain-containing protein 3B, mitochondrial Homo sapiens
P0DPI2 3.56e-56 182 45 3 220 1 GATD3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Homo sapiens
F1QCN0 6.86e-53 173 42 3 223 3 gatd3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Danio rerio
Q90257 4.27e-38 135 31 5 232 1 es1 ES1 protein, mitochondrial Danio rerio
Q48464 1.43e-17 77 65 0 58 3 elbB Putative glyoxalase ElbB (Fragment) Klebsiella oxytoca

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_03090
Feature type CDS
Gene elbB
Product isoprenoid biosynthesis glyoxalase ElbB
Location 16494 - 17144 (strand: -1)
Length 651 (nucleotides) / 216 (amino acids)

Contig

Accession contig_3
Length 210665 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_712
Orthogroup size 7
N. genomes 7

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3155 Defense mechanisms (V) V Glyoxalase ElbB, DJ-1 superfamily

Protein Sequence

MKSVGIVLSGCGVFDGSEIHESVLSLLSLTQSGAQVYFFAPDEPQRTVINHLSGEEKSEKRNMLEESARISRGEIRPLAEADASQLDALIVPGGFGAAKNLCDFAVKGADCEIDKYFLLLTREMLSQGKPMGFMCIAPVMIPKIVNSSVQLTIGNDSDIAAAIAEMGGVHVNCTVDNIVVDETHKIVTTPAYMLAENIAQAQIGIDKLVKKVLGMA

Flanking regions ( +/- flanking 50bp)

TTTGCACCTCTAAAGGGTTAAGCATTAATCTACTACAAAAGGAGTCAGATATGAAATCTGTTGGTATCGTTTTAAGCGGATGCGGTGTTTTCGACGGTAGTGAAATCCATGAATCCGTTCTTTCGCTGCTCAGTTTAACCCAATCCGGCGCACAGGTGTATTTTTTTGCACCGGATGAACCTCAACGCACTGTTATCAATCATCTTTCCGGTGAGGAAAAATCAGAAAAGCGCAATATGCTGGAAGAGTCAGCACGGATTTCACGCGGAGAAATCCGTCCGCTGGCCGAAGCGGATGCGTCACAGCTGGATGCACTGATTGTTCCGGGCGGTTTCGGTGCGGCAAAAAATCTGTGCGATTTTGCCGTAAAAGGTGCTGACTGCGAAATAGATAAATATTTTTTATTATTGACGCGTGAGATGTTATCTCAGGGCAAACCGATGGGATTTATGTGTATTGCACCGGTGATGATCCCGAAAATCGTTAATTCATCAGTACAACTTACCATTGGCAATGATTCTGATATTGCGGCGGCGATCGCGGAAATGGGCGGCGTACATGTCAATTGCACGGTGGATAATATCGTCGTAGATGAAACCCATAAAATCGTGACAACCCCAGCCTATATGCTGGCTGAGAATATCGCACAGGCACAGATCGGGATTGATAAACTCGTGAAGAAAGTGCTCGGAATGGCCTGATAAAGAATGAGGAAAATGATGGGGAGGATATTGCGGTTTCTGCGAAAAAT