Homologs in group_712

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03090 FBDBKF_03090 64.4 Morganella morganii S1 elbB isoprenoid biosynthesis glyoxalase ElbB
EHELCC_07445 EHELCC_07445 64.4 Morganella morganii S2 elbB isoprenoid biosynthesis glyoxalase ElbB
NLDBIP_07770 NLDBIP_07770 64.4 Morganella morganii S4 elbB isoprenoid biosynthesis glyoxalase ElbB
LHKJJB_07305 LHKJJB_07305 64.4 Morganella morganii S3 elbB isoprenoid biosynthesis glyoxalase ElbB
HKOGLL_03625 HKOGLL_03625 64.4 Morganella morganii S5 elbB isoprenoid biosynthesis glyoxalase ElbB
F4V73_RS11830 F4V73_RS11830 65.7 Morganella psychrotolerans elbB isoprenoid biosynthesis glyoxalase ElbB

Distribution of the homologs in the orthogroup group_712

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_712

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABU6 1.13e-92 273 58 0 216 3 elbB Glyoxalase ElbB Shigella flexneri
P0ABU5 1.13e-92 273 58 0 216 1 elbB Glyoxalase ElbB Escherichia coli (strain K12)
P56571 2.61e-58 187 44 3 222 1 None ES1 protein homolog, mitochondrial Rattus norvegicus
P0DPI2 2.61e-57 185 43 3 222 1 GATD3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Homo sapiens
A0A0B4J2D5 3.21e-57 185 43 3 222 5 GATD3B Putative glutamine amidotransferase-like class 1 domain-containing protein 3B, mitochondrial Homo sapiens
Q9D172 7.86e-57 184 43 3 222 1 Gatd3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Mus musculus
F1QCN0 1.58e-54 177 42 3 223 3 gatd3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Danio rerio
Q90257 2.29e-39 139 32 5 232 1 es1 ES1 protein, mitochondrial Danio rerio
Q48464 1.74e-17 77 62 0 58 3 elbB Putative glyoxalase ElbB (Fragment) Klebsiella oxytoca

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18305
Feature type CDS
Gene elbB
Product isoprenoid biosynthesis glyoxalase ElbB
Location 4021144 - 4021794 (strand: 1)
Length 651 (nucleotides) / 216 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_712
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01965 DJ-1/PfpI family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3155 Defense mechanisms (V) V Glyoxalase ElbB, DJ-1 superfamily

Protein Sequence

MKSIAVILSGCGVFDGSEIHESVLTMLALSQNKAEVHYFSPNDFQPTVINHITGEEKAEKRNMMEEASRISRGKISPLSDAKAENFDAVIIPGGFGAAKNLCNFATKGVQCEINQQLLTFVQKMHQQKKPLGLMCIAPVMLPKMLNAPVKLTIGNDAKTAEMITEMGGIHINCPVDEIVVDDEYRVVTTPAYMLAESIAQAQVGIEKLVKKVLEMA

Flanking regions ( +/- flanking 50bp)

TTTACACCTATAAATGGGTAACTAGTAATCTACTACAAATGGAGAAAGATATGAAATCAATTGCGGTAATTTTAAGTGGTTGTGGTGTCTTTGATGGCAGTGAAATTCACGAATCAGTGCTCACAATGCTTGCTTTAAGCCAAAATAAAGCTGAGGTTCATTATTTTTCACCTAATGATTTTCAACCTACTGTAATTAATCATATTACTGGAGAAGAAAAAGCAGAAAAAAGGAATATGATGGAGGAGGCTTCGCGTATTTCTCGTGGAAAAATATCGCCTTTATCAGATGCTAAGGCTGAAAACTTTGATGCGGTAATTATCCCCGGAGGTTTTGGTGCAGCAAAGAACTTATGTAATTTCGCCACGAAAGGTGTTCAGTGTGAAATTAACCAACAGCTCTTAACTTTTGTTCAAAAGATGCATCAACAGAAAAAACCACTAGGTTTAATGTGTATCGCCCCCGTTATGTTACCAAAGATGTTAAATGCCCCAGTAAAACTAACCATTGGTAATGATGCAAAAACGGCAGAAATGATCACCGAAATGGGAGGGATACATATTAATTGTCCTGTCGACGAAATAGTGGTTGATGATGAGTATCGGGTTGTGACCACCCCTGCATATATGCTGGCAGAATCGATAGCACAAGCGCAGGTGGGGATTGAGAAGCTGGTTAAAAAAGTACTAGAAATGGCATAACAATAGAGTGAATACAGCAGATGGTACTAGTGAGAAAGTTAAAGAAACTA