Homologs in group_783

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03090 FBDBKF_03090 89.4 Morganella morganii S1 elbB isoprenoid biosynthesis glyoxalase ElbB
EHELCC_07445 EHELCC_07445 89.4 Morganella morganii S2 elbB isoprenoid biosynthesis glyoxalase ElbB
NLDBIP_07770 NLDBIP_07770 89.4 Morganella morganii S4 elbB isoprenoid biosynthesis glyoxalase ElbB
LHKJJB_07305 LHKJJB_07305 89.4 Morganella morganii S3 elbB isoprenoid biosynthesis glyoxalase ElbB
HKOGLL_03625 HKOGLL_03625 89.4 Morganella morganii S5 elbB isoprenoid biosynthesis glyoxalase ElbB
PMI_RS18305 PMI_RS18305 65.7 Proteus mirabilis HI4320 elbB isoprenoid biosynthesis glyoxalase ElbB

Distribution of the homologs in the orthogroup group_783

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_783

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABU6 6.7e-93 274 60 0 216 3 elbB Glyoxalase ElbB Shigella flexneri
P0ABU5 6.7e-93 274 60 0 216 1 elbB Glyoxalase ElbB Escherichia coli (strain K12)
P56571 1.6e-58 188 44 3 224 1 None ES1 protein homolog, mitochondrial Rattus norvegicus
Q9D172 1.11e-56 183 44 3 224 1 Gatd3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Mus musculus
A0A0B4J2D5 6.04e-55 179 43 3 224 5 GATD3B Putative glutamine amidotransferase-like class 1 domain-containing protein 3B, mitochondrial Homo sapiens
P0DPI2 7.66e-55 179 43 3 224 1 GATD3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Homo sapiens
F1QCN0 5.7e-50 166 41 3 224 3 gatd3 Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial Danio rerio
Q90257 1.3e-36 132 31 6 232 1 es1 ES1 protein, mitochondrial Danio rerio
Q48464 1.19e-16 74 64 0 54 3 elbB Putative glyoxalase ElbB (Fragment) Klebsiella oxytoca

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11830
Feature type CDS
Gene elbB
Product isoprenoid biosynthesis glyoxalase ElbB
Location 522004 - 522657 (strand: 1)
Length 654 (nucleotides) / 217 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_783
Orthogroup size 7
N. genomes 7

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3155 Defense mechanisms (V) V Glyoxalase ElbB, DJ-1 superfamily

Protein Sequence

MKSVGIVLSGCGVFDGSEIHESVLSLLSLTQSGACVHFFAPDEPQRTVINHLSGEEKNDKRNILEESARISRGQIRPLSEADAAQLDALIIPGGFGAAKNLCDFATKGSACEINKYFLLLTREMLAQNKPMGFMCIAPVMIPKIVNSSVQLTIGDDPAIAEAIAEMGGIHVNCTVDNIVVDETHKIVTTPAYMLAENIVQAQTGIDKLVKKVLQMAG

Flanking regions ( +/- flanking 50bp)

GTTTGCGTCTCTGAAAGGTCAGGGATTAATCTACTGTAAAGGGGTCAGATATGAAATCCGTTGGTATTGTTTTAAGTGGGTGTGGTGTTTTTGACGGTAGCGAGATCCATGAATCCGTTCTTTCACTGCTCAGTTTGACACAATCCGGTGCCTGCGTTCATTTCTTTGCACCGGATGAGCCTCAACGCACTGTTATTAATCACCTTTCAGGTGAAGAAAAAAACGACAAGCGTAATATTCTGGAAGAGTCCGCACGGATTTCCCGCGGGCAAATCCGTCCGTTATCGGAGGCGGATGCAGCGCAGCTTGATGCCCTGATTATCCCCGGAGGATTTGGTGCCGCCAAAAATTTATGTGATTTCGCCACAAAAGGATCTGCCTGTGAAATTAATAAATATTTTTTATTATTAACGCGGGAAATGCTGGCACAAAACAAACCGATGGGATTTATGTGTATCGCACCGGTAATGATCCCGAAAATTGTAAATTCATCAGTTCAGCTTACCATTGGTGATGATCCCGCTATTGCAGAAGCGATCGCGGAAATGGGTGGCATTCATGTAAACTGTACGGTGGATAATATCGTCGTAGACGAAACCCATAAAATCGTAACAACACCAGCTTATATGCTGGCTGAGAATATTGTACAGGCGCAGACCGGTATTGATAAATTGGTTAAGAAAGTTCTGCAAATGGCCGGATAATCAGTGAGGGAAATTATGGGGAGGATTTTGCGGTTTCTGCGGAAAATAGT