Homologs in group_15

Help

18 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08400 FBDBKF_08400 52.9 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_10620 FBDBKF_10620 65.8 Morganella morganii S1 sdaC Amino acid permease
EHELCC_03165 EHELCC_03165 100.0 Morganella morganii S2 sdaC Amino acid permease
EHELCC_13125 EHELCC_13125 52.9 Morganella morganii S2 sdaC Amino acid permease
EHELCC_14955 EHELCC_14955 65.8 Morganella morganii S2 sdaC Amino acid permease
NLDBIP_00295 NLDBIP_00295 100.0 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_13465 NLDBIP_13465 52.9 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_14785 NLDBIP_14785 65.8 Morganella morganii S4 sdaC Amino acid permease
LHKJJB_01740 LHKJJB_01740 100.0 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_13090 LHKJJB_13090 52.9 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_14560 LHKJJB_14560 65.8 Morganella morganii S3 sdaC Amino acid permease
HKOGLL_01780 HKOGLL_01780 100.0 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_11940 HKOGLL_11940 52.9 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_13180 HKOGLL_13180 65.8 Morganella morganii S5 sdaC Amino acid permease
F4V73_RS05190 F4V73_RS05190 93.4 Morganella psychrotolerans - amino acid permease
F4V73_RS09600 F4V73_RS09600 51.8 Morganella psychrotolerans - amino acid permease
F4V73_RS14330 F4V73_RS14330 65.3 Morganella psychrotolerans - aromatic amino acid transport family protein
PMI_RS13530 PMI_RS13530 50.1 Proteus mirabilis HI4320 - amino acid permease

Distribution of the homologs in the orthogroup group_15

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_15

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37660 3.67e-179 509 59 1 416 1 yhjV Inner membrane transport protein YhjV Escherichia coli (strain K12)
P42628 7.12e-155 448 51 1 424 1 dlsT Probable serine transporter Escherichia coli (strain K12)
Q8XAF5 2.44e-154 447 51 1 424 1 dlsT Serine transporter Escherichia coli O157:H7
P44615 2.81e-35 138 25 5 393 3 sdaC Serine transporter SdaC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AAD6 4.77e-33 132 26 10 436 1 sdaC Serine transporter SdaC Escherichia coli (strain K12)
P0AAD7 4.77e-33 132 26 10 436 3 sdaC Serine transporter SdaC Escherichia coli O157:H7
Q83QD0 1.33e-29 122 25 10 436 3 sdaC Serine transporter SdaC Shigella flexneri
B7LQI2 6.26e-24 106 23 11 429 3 tdcC Threonine/serine transporter TdcC Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A9MPR1 1.07e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q8ZLW1 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TVX7 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella schwarzengrund (strain CVM19633)
B5BGF7 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain AKU_12601)
C0PZ16 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi C (strain RKS4594)
Q5PCA8 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TIX1 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella heidelberg (strain SL476)
B5REJ9 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QZS1 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella enteritidis PT4 (strain P125109)
B5FHX7 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella dublin (strain CT_02021853)
Q57JL7 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella choleraesuis (strain SC-B67)
B5F6Q0 1.21e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella agona (strain SL483)
A9N628 1.29e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
A8AQ08 1.44e-23 105 24 13 456 3 tdcC Threonine/serine transporter TdcC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B4T6B2 2.69e-23 104 24 13 457 3 tdcC Threonine/serine transporter TdcC Salmonella newport (strain SL254)
D0ZE09 1.27e-22 102 25 13 449 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda (strain EIB202)
Q4G4A7 1.3e-22 102 25 13 449 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda
A6TAU9 1.82e-22 102 23 11 446 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XVZ7 1.82e-22 102 23 11 446 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae (strain 342)
A4WEU1 2.2e-22 102 23 10 449 3 tdcC Threonine/serine transporter TdcC Enterobacter sp. (strain 638)
Q3YXB3 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Shigella sonnei (strain Ss046)
P0AAD8 6.45e-22 100 25 14 451 1 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12)
A8A4S9 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O9:H4 (strain HS)
B1XGT1 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / DH10B)
C4ZR30 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / MC4100 / BW2952)
B7NJY3 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YS06 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0AAD9 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7
A7ZS06 6.45e-22 100 25 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O139:H28 (strain E24377A / ETEC)
Q31WR5 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 4 (strain Sb227)
B2U0A0 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R6L7 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain UTI89 / UPEC)
B6I491 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SE11)
Q8FDC3 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCY8 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AG28 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O1:K1 / APEC
B7M023 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O8 (strain IAI1)
B7N0B7 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O81 (strain ED1a)
B7LH53 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain 55989 / EAEC)
B7UJ20 9.32e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q83Q28 9.41e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Shigella flexneri
Q0T0F2 9.41e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Shigella flexneri serotype 5b (strain 8401)
B1LFL8 9.41e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SMS-3-5 / SECEC)
B7NDA4 9.41e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1IRJ9 9.41e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B7MB46 9.86e-22 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Escherichia coli O45:K1 (strain S88 / ExPEC)
Q32BK1 1.09e-21 100 24 14 451 3 tdcC Threonine/serine transporter TdcC Shigella dysenteriae serotype 1 (strain Sd197)
A1JIM8 2.42e-21 99 23 10 426 3 tdcC Threonine/serine transporter TdcC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P63340 3.56e-17 86 22 10 418 1 yqeG Inner membrane transport protein YqeG Escherichia coli (strain K12)
P63341 3.56e-17 86 22 10 418 3 yqeG Inner membrane transport protein YqeG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P63342 3.56e-17 86 22 10 418 3 yqeG Inner membrane transport protein YqeG Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_02695
Feature type CDS
Gene sdaC
Product Amino acid permease
Location 234303 - 235589 (strand: 1)
Length 1287 (nucleotides) / 428 (amino acids)

Contig

Accession contig_2
Length 292399 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_15
Orthogroup size 19
N. genomes 7

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Protein Sequence

MQDSIQTGANANSDLKKIPFTKYDAGWVVLCIGMAIGSGIVFMPVQIGIKGIWVFIAATLLSYPAIYWLQNLYLRTLSESEECEDYASVITQYLGKNWGVALGIAYFLMLLHGMFSYSLAVTFDSASYIKTFGLTEGLLSDSVWYGLIILTVLVAIAAQGERLLFKVSGPMVIVKFGIIVLLGIVMVPYWNFANISAFPDFLPFLRDVFLTLPFTLFSILFVQILSPMNIAYRRLEKDKRVATYRAVRANRVAYIILAVAVLFFAFSFTFSISHDQAVSAFEQNISALAIAAQVIPGSVVKVMTAMLNIFAILTAFLGIYLGFQEAIKGIVVNILTRFMPQERINQTVLHYGVCIGVILSLWFWVSTRFSILFFMQLGGPLFGVVSCLIPCYLVYRVPVLHKFKGATVWFIIFFGVLLCLSPFFKFFE

Flanking regions ( +/- flanking 50bp)

TTGTTCCTGACTTTTTAAATAATTAAATCTATAACGTTGAGGAATTGACTATGCAAGACAGCATTCAGACAGGTGCAAATGCAAATAGTGATTTAAAAAAGATACCCTTTACCAAATATGATGCCGGGTGGGTTGTATTATGTATCGGGATGGCGATCGGTTCCGGGATTGTTTTTATGCCGGTTCAGATCGGTATTAAAGGCATCTGGGTATTTATTGCCGCCACATTATTGTCATACCCGGCGATTTACTGGCTGCAGAATTTATATCTGAGGACATTATCAGAATCGGAAGAATGTGAAGATTATGCCAGCGTTATCACGCAGTATCTGGGGAAAAACTGGGGGGTTGCCCTTGGTATCGCCTACTTCCTGATGCTGCTGCACGGCATGTTCTCCTATTCGCTCGCCGTGACCTTTGACAGTGCCTCCTACATCAAAACATTCGGTTTAACAGAAGGTTTGTTATCAGATTCGGTGTGGTACGGGCTGATTATCCTGACGGTTCTGGTGGCTATCGCCGCACAGGGGGAGCGCCTGTTATTTAAGGTCTCCGGCCCGATGGTAATAGTGAAATTCGGGATTATCGTATTACTCGGGATTGTAATGGTGCCTTACTGGAATTTTGCCAATATCAGCGCGTTCCCGGACTTCCTGCCGTTCCTGCGGGATGTGTTTCTGACACTGCCGTTTACCCTGTTCTCCATTCTGTTCGTGCAGATTTTAAGCCCAATGAACATTGCCTACCGCAGACTGGAAAAAGACAAGCGTGTCGCAACTTACCGCGCGGTACGGGCAAACCGGGTGGCGTATATTATTCTGGCCGTTGCTGTTCTGTTCTTTGCCTTCTCGTTTACGTTCTCGATAAGCCACGACCAGGCCGTCTCAGCGTTTGAGCAGAATATCTCGGCACTGGCAATTGCCGCACAGGTAATTCCGGGCTCCGTTGTTAAAGTCATGACCGCAATGCTGAATATTTTCGCGATTCTGACCGCGTTTCTCGGTATTTATCTGGGTTTCCAGGAAGCGATTAAAGGTATTGTGGTGAATATCCTGACCCGCTTTATGCCGCAGGAGCGCATTAATCAGACCGTACTGCATTACGGTGTATGTATCGGGGTGATCCTGTCCCTGTGGTTCTGGGTCTCCACCCGCTTCTCAATTCTGTTCTTTATGCAGCTCGGCGGGCCGTTATTCGGCGTGGTTTCCTGCCTGATCCCGTGCTATCTGGTTTACCGCGTGCCGGTCTTACATAAATTCAAAGGTGCAACAGTCTGGTTTATTATCTTCTTCGGCGTGCTGTTGTGTCTCTCTCCGTTCTTTAAGTTTTTCGAATAACGCTGTAAATGAATAATGACGTATTACGCGTGAGGATGTTATGACTAAAA