Homologs in group_669

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_02865 EHELCC_02865 100.0 Morganella morganii S2 uspE universal stress protein UspE
NLDBIP_00595 NLDBIP_00595 100.0 Morganella morganii S4 uspE universal stress protein UspE
LHKJJB_01440 LHKJJB_01440 100.0 Morganella morganii S3 uspE universal stress protein UspE
HKOGLL_01480 HKOGLL_01480 100.0 Morganella morganii S5 uspE universal stress protein UspE
F4V73_RS04775 F4V73_RS04775 94.9 Morganella psychrotolerans uspE universal stress protein UspE
PMI_RS05800 PMI_RS05800 81.3 Proteus mirabilis HI4320 uspE universal stress protein UspE

Distribution of the homologs in the orthogroup group_669

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_669

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P60005 0.0 539 78 0 314 3 uspE Universal stress protein E Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q8ZE81 9.45e-176 491 71 1 314 3 uspE Universal stress protein E Yersinia pestis
Q8ZP84 5.2e-168 472 68 1 315 1 uspE Universal stress protein E Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AAC3 2.17e-167 470 68 1 315 3 uspE Universal stress protein E Shigella flexneri
P0AAC0 2.17e-167 470 68 1 315 1 uspE Universal stress protein E Escherichia coli (strain K12)
P0AAC1 2.17e-167 470 68 1 315 3 uspE Universal stress protein E Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAC2 2.17e-167 470 68 1 315 3 uspE Universal stress protein E Escherichia coli O157:H7
Q8Z788 2.28e-167 470 68 1 315 3 uspE Universal stress protein E Salmonella typhi
P44195 8.97e-98 293 48 3 304 1 uspE Universal stress protein E homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57951 0.000137 45 37 0 59 3 MJ0531 Universal stress protein MJ0531 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P37903 0.000199 44 23 6 155 1 uspF Universal stress protein F Escherichia coli (strain K12)
P0A4P8 0.00057 43 23 6 155 3 uspF Universal stress protein F Shigella flexneri
P0A4P6 0.00057 43 23 6 155 3 uspF Universal stress protein F Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TI19 0.00057 43 23 6 155 3 uspF Universal stress protein F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P0A4P7 0.00057 43 23 6 155 3 uspF Universal stress protein F Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_02395
Feature type CDS
Gene uspE
Product universal stress protein UspE
Location 173299 - 174246 (strand: -1)
Length 948 (nucleotides) / 315 (amino acids)

Contig

Accession contig_2
Length 292399 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_669
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00582 Universal stress protein family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0589 Signal transduction mechanisms (T) T Nucleotide-binding universal stress protein, UspA family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K14055 universal stress protein E - -

Protein Sequence

MSEYQNLLVAIDPNQDDQPALRRAVYIVQRNGGRIKAFLPIYDLSYDMTTLLSPEERDAMRKGVIAQRCAWIKQQARYYLEAGIDIEVKVVWHNRPYEAIIREVVSGGHDLLLKMAHQNDKFESLIFTPLDWQLLRKCPCPVWMVKDKVWPEQGSVVVGVNLSNEESYHDALNLKLVSLTQDLAKRIVKDPAIHLVSAYPVAPINIAIELPDFDPNTYNNALRGQHLIAMKELRQQFSISEEYTHVYEGLPEKVIPEVCGELNAGVVVLGIIGRTGISAAFLGNTAEHVIDHLKCDLLAVKPDGFVCPIDTSDDD

Flanking regions ( +/- flanking 50bp)

CGTTTGGTTTATCTTTATAGATACGTATCCAGCCCCGCGAGGAGAGATGAATGTCTGAATATCAGAACCTCTTAGTTGCAATAGACCCCAATCAGGATGATCAGCCGGCATTACGGCGTGCGGTATATATCGTGCAACGCAATGGCGGACGCATCAAAGCTTTCTTACCTATCTATGATCTGTCATACGATATGACCACTCTGTTGTCCCCTGAAGAACGGGATGCTATGCGCAAAGGCGTAATTGCCCAGCGTTGCGCGTGGATCAAACAGCAGGCGCGTTATTATCTGGAAGCCGGCATCGATATCGAAGTGAAAGTGGTATGGCATAACCGGCCTTATGAGGCGATTATCAGGGAAGTTGTCAGTGGTGGTCATGACCTGCTGCTGAAAATGGCGCATCAGAATGATAAGTTTGAGTCTCTGATTTTCACCCCGCTGGACTGGCAGCTTCTGCGCAAATGTCCGTGTCCGGTCTGGATGGTTAAGGATAAAGTCTGGCCAGAACAGGGTTCTGTGGTGGTCGGTGTGAACCTGTCCAATGAAGAATCCTACCATGATGCGCTGAATCTCAAACTGGTGTCGCTGACACAGGATCTCGCAAAACGGATTGTGAAAGACCCGGCAATCCATCTGGTCAGTGCTTATCCGGTGGCGCCTATCAATATCGCTATCGAATTACCGGATTTTGACCCGAATACTTACAACAACGCACTGCGCGGCCAGCATCTTATCGCTATGAAAGAGCTGCGTCAGCAATTCTCCATCAGCGAAGAGTACACCCACGTTTATGAGGGATTACCGGAGAAAGTGATCCCGGAAGTGTGCGGTGAACTGAATGCCGGGGTGGTGGTGCTGGGTATTATCGGCCGGACCGGTATTTCTGCCGCGTTCCTCGGCAATACCGCAGAGCATGTTATCGACCATCTGAAGTGTGATTTACTGGCGGTGAAACCGGACGGCTTTGTTTGTCCGATCGATACCAGTGATGATGATTAATCCTGTCTCCCGCAGAGGCCACGGCTTCTGCGGGAATTTTCTGCGCGTTC