Homologs in group_422

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19050 FBDBKF_19050 92.6 Morganella morganii S1 paaY Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily
EHELCC_18795 EHELCC_18795 92.6 Morganella morganii S2 paaY Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily
NLDBIP_18810 NLDBIP_18810 92.6 Morganella morganii S4 paaY Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily
LHKJJB_18665 LHKJJB_18665 92.6 Morganella morganii S3 paaY Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily
HKOGLL_18400 HKOGLL_18400 92.6 Morganella morganii S5 paaY Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily
PMI_RS13100 PMI_RS13100 34.8 Proteus mirabilis HI4320 caiE carnitine operon protein CaiE
PMI_RS16340 PMI_RS16340 70.4 Proteus mirabilis HI4320 - gamma carbonic anhydrase family protein

Distribution of the homologs in the orthogroup group_422

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_422

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A9X0 9.77e-87 254 77 0 162 3 yrdA Protein YrdA Shigella flexneri
P0A9W9 9.77e-87 254 77 0 162 1 yrdA Protein YrdA Escherichia coli (strain K12)
Q9FWR5 2.13e-36 129 45 1 149 1 GAMMACA1 Gamma carbonic anhydrase 1, mitochondrial Arabidopsis thaliana
Q9C6B3 1.39e-35 127 43 2 164 1 GAMMACA2 Gamma carbonic anhydrase 2, mitochondrial Arabidopsis thaliana
O34696 2.65e-32 116 44 1 150 3 ytoA Uncharacterized transferase YtoA Bacillus subtilis (strain 168)
P40882 5.95e-32 115 40 1 155 3 PA3753 Uncharacterized protein PA3753 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q57752 6.51e-31 112 41 1 149 3 MJ0304 Probable carbonic anhydrase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q5KW03 2.65e-30 111 44 2 150 1 GK2848 Carbonic anhydrase Geobacillus kaustophilus (strain HTA426)
Q94AU7 1.72e-26 103 37 2 151 1 GAMMACA3 Gamma carbonic anhydrase 3, mitochondrial Arabidopsis thaliana
Q9FMV1 2.06e-23 95 38 2 155 1 GAMMACAL1 Gamma carbonic anhydrase-like 1, mitochondrial Arabidopsis thaliana
B1LFW8 1.03e-22 92 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli (strain SMS-3-5 / SECEC)
Q1RGG3 1.41e-22 92 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli (strain UTI89 / UPEC)
Q8FLA7 1.41e-22 92 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLV4 1.41e-22 92 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1A785 1.41e-22 92 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O1:K1 / APEC
B7MAF8 1.41e-22 92 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O45:K1 (strain S88 / ExPEC)
Q9SMN1 1.47e-22 93 37 2 155 1 GAMMACAL2 Gamma carbonic anhydrase-like 2, mitochondrial Arabidopsis thaliana
B7UI81 1.47e-22 92 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P77181 1.5e-22 92 34 1 149 3 paaY Phenylacetic acid degradation protein PaaY Escherichia coli (strain K12)
B7N7R0 1.57e-22 91 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7MNP2 1.57e-22 91 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O81 (strain ED1a)
P39206 2.7e-22 91 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli (strain K12)
B1XBG0 2.7e-22 91 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli (strain K12 / DH10B)
C4ZPW1 2.7e-22 91 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli (strain K12 / MC4100 / BW2952)
B7NHD9 3.41e-22 90 35 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YYC9 1.12e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XA36 1.12e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O157:H7
Q3Z5X4 1.31e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Shigella sonnei (strain Ss046)
A7ZVY5 1.31e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O9:H4 (strain HS)
B7M0D2 1.31e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O8 (strain IAI1)
B7L4F8 1.31e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli (strain 55989 / EAEC)
A7ZHC6 1.31e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli O139:H28 (strain E24377A / ETEC)
Q83SQ8 1.6e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Shigella flexneri
Q0T8F9 1.6e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Shigella flexneri serotype 5b (strain 8401)
Q54JC2 1.8e-21 90 33 1 162 1 DDB_G0288155 Uncharacterized protein DDB_G0288155 Dictyostelium discoideum
B1IRE1 2.21e-21 89 34 1 149 3 caiE Carnitine operon protein CaiE Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B7LWM6 2.71e-21 88 36 1 138 3 caiE Carnitine operon protein CaiE Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q32K62 1.9e-20 86 34 1 149 3 caiE Carnitine operon protein CaiE Shigella dysenteriae serotype 1 (strain Sd197)
B4TWR2 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella schwarzengrund (strain CVM19633)
B5BL53 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella paratyphi A (strain AKU_12601)
C0Q4L1 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella paratyphi C (strain RKS4594)
Q5PIL2 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T6J4 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella newport (strain SL254)
B4TIG8 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella heidelberg (strain SL476)
B5RGA3 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R1Q8 2.01e-19 84 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella enteritidis PT4 (strain P125109)
B5FHG3 2.08e-19 83 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella dublin (strain CT_02021853)
B5F748 2.62e-19 83 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella agona (strain SL483)
Q8ZRX6 2.83e-19 83 34 1 138 3 caiE Carnitine operon protein CaiE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z9L6 3.17e-19 83 34 1 138 3 caiE Carnitine operon protein CaiE Salmonella typhi
Q57TJ2 8.98e-19 82 32 1 149 3 caiE Carnitine operon protein CaiE Salmonella choleraesuis (strain SC-B67)
Q8GB16 1.46e-18 81 34 1 148 3 caiE Carnitine operon protein CaiE Proteus sp. (strain LE138)
A9MYJ4 3.23e-18 80 31 1 149 3 caiE Carnitine operon protein CaiE Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
A8ALR8 9.13e-18 79 33 1 148 3 caiE Carnitine operon protein CaiE Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8DKB5 5.68e-08 54 35 5 131 1 ccmM Carboxysome assembly protein CcmM Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
Q03513 8.19e-08 53 29 5 147 1 ccmM Carboxysome assembly protein CcmM Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P40881 6.39e-07 50 26 8 182 1 MSTHT_0588 Carbonic anhydrase Methanosarcina thermophila (strain ATCC 43570 / DSM 1825 / OCM 12 / VKM B-1830 / TM-1)
Q8YYI3 8.16e-06 48 31 6 134 1 ccmM Carboxysome assembly protein CcmM Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q118R6 9.08e-06 47 30 4 139 3 glmU Bifunctional protein GlmU Trichodesmium erythraeum (strain IMS101)
P39856 0.000143 43 32 1 70 3 capG Protein CapG Staphylococcus aureus
O30711 0.000407 43 34 6 125 3 ccmM Carboxysome assembly protein CcmM Picosynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)
Q5X0C0 0.000499 42 43 0 51 3 lpxD1 UDP-3-O-acylglucosamine N-acyltransferase 1 Legionella pneumophila (strain Lens)
Q5ZZB1 0.000509 42 43 0 51 3 lpxD1 UDP-3-O-acylglucosamine N-acyltransferase 1 Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Q5X8X9 0.000509 42 43 0 51 3 lpxD1 UDP-3-O-acylglucosamine N-acyltransferase 1 Legionella pneumophila (strain Paris)
B2TS78 0.000823 42 43 1 51 3 dapH 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase Clostridium botulinum (strain Eklund 17B / Type B)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19115
Feature type CDS
Gene -
Product gamma carbonic anhydrase family protein
Location 29736 - 30224 (strand: -1)
Length 489 (nucleotides) / 162 (amino acids)

Contig

Accession term accessions NZ_VXKB01000011 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 30728 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_422
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00132 Bacterial transferase hexapeptide (six repeats)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0663 General function prediction only (R) R Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01726 gamma-carbonic anhydrase [EC:4.2.1.-] - -

Protein Sequence

MIDDSSVIIGDVRIADDVGIWPLVVARGDVNYIQVGQRTNIQDGSVLHVSHQSDDNPAGHPLIIGADVTVGHKVMLHGCTIGDRVLVGMGSILLDGVIVEDDVIIGAGSLVSPGKRLESGYLYLGSPAKAARPLKPEEYEGLKHSADNYVMWKNDYLSQGNR

Flanking regions ( +/- flanking 50bp)

ATAAACTCCGCCCTTATCTGACATTAACGCCATCTATTGGTGAAAATGTCATGATCGACGACTCTTCTGTCATTATCGGTGATGTTCGTATAGCAGATGATGTCGGTATCTGGCCTCTTGTCGTGGCACGCGGGGATGTAAACTACATTCAGGTAGGACAGCGTACAAATATTCAGGATGGTTCTGTTTTACATGTATCCCATCAGTCCGACGATAACCCGGCTGGTCATCCTCTTATTATTGGTGCTGATGTGACGGTCGGCCACAAAGTAATGCTGCACGGCTGTACTATAGGGGATCGTGTTCTTGTAGGGATGGGCTCGATTCTGCTGGATGGCGTGATCGTTGAAGATGATGTCATTATCGGCGCAGGTAGTCTGGTGTCTCCCGGTAAACGACTGGAAAGCGGATACCTTTACTTAGGCAGCCCCGCAAAAGCCGCCCGCCCGCTGAAACCGGAAGAATATGAAGGACTGAAGCATTCAGCAGATAACTATGTCATGTGGAAAAACGATTATCTGTCGCAGGGTAACCGGTAAGGTGATTCTTCTGCTCCGTCCTTTTCAATAAACTCCGCGAACTCTTCCTC