Homologs in group_2368

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19090 FBDBKF_19090 89.0 Morganella morganii S1 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
EHELCC_18835 EHELCC_18835 89.0 Morganella morganii S2 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
NLDBIP_18850 NLDBIP_18850 89.0 Morganella morganii S4 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
LHKJJB_18705 LHKJJB_18705 89.0 Morganella morganii S3 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
HKOGLL_18440 HKOGLL_18440 89.0 Morganella morganii S5 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
PMI_RS16300 PMI_RS16300 69.4 Proteus mirabilis HI4320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB

Distribution of the homologs in the orthogroup group_2368

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2368

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
C6DFR7 0.0 641 70 1 428 3 rsmB Ribosomal RNA small subunit methyltransferase B Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D000 0.0 639 70 1 428 3 rsmB Ribosomal RNA small subunit methyltransferase B Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A1JRZ3 0.0 621 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A8GKG7 0.0 620 69 1 428 3 rsmB Ribosomal RNA small subunit methyltransferase B Serratia proteamaculans (strain 568)
A9R925 0.0 614 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pestis bv. Antiqua (strain Angola)
B4F1L5 0.0 614 68 1 426 3 rsmB Ribosomal RNA small subunit methyltransferase B Proteus mirabilis (strain HI4320)
B1JJH6 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q664V2 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TH21 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pestis (strain Pestoides F)
Q1CCX4 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZJ81 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pestis
B2K506 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C2X7 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pestis bv. Antiqua (strain Antiqua)
A7FNK4 0.0 613 68 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A6TEU2 0.0 600 66 2 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XNC2 0.0 600 66 2 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Klebsiella pneumoniae (strain 342)
A7MPE7 0.0 592 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Cronobacter sakazakii (strain ATCC BAA-894)
A8AQI3 0.0 592 66 1 424 3 rsmB Ribosomal RNA small subunit methyltransferase B Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q3YWX1 0.0 592 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Shigella sonnei (strain Ss046)
B4SUR0 0.0 591 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella newport (strain SL254)
Q31VY8 0.0 591 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Shigella boydii serotype 4 (strain Sb227)
Q8ZLM5 0.0 591 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
C0PZV1 0.0 591 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella paratyphi C (strain RKS4594)
A9N8B3 0.0 591 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q57J62 0.0 591 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella choleraesuis (strain SC-B67)
B4TJX9 0.0 590 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella heidelberg (strain SL476)
P36929 0.0 590 65 1 429 1 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain K12)
B1IQ11 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A593 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O9:H4 (strain HS)
B1X6E1 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain K12 / DH10B)
C4ZUE3 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain K12 / MC4100 / BW2952)
B7UK12 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B4TXB2 0.0 590 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella schwarzengrund (strain CVM19633)
B6I202 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain SE11)
B7M0Z4 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O8 (strain IAI1)
B7NLK8 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7LHZ0 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain 55989 / EAEC)
A7ZSH7 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O139:H28 (strain E24377A / ETEC)
B5BGV5 0.0 590 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella paratyphi A (strain AKU_12601)
Q5PIT6 0.0 590 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5FJI4 0.0 590 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella dublin (strain CT_02021853)
B7N0S9 0.0 590 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O81 (strain ED1a)
B5F7R5 0.0 589 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella agona (strain SL483)
B7LRQ5 0.0 589 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A4WF97 0.0 589 66 2 423 3 rsmB Ribosomal RNA small subunit methyltransferase B Enterobacter sp. (strain 638)
Q32B61 0.0 588 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Shigella dysenteriae serotype 1 (strain Sd197)
B2U2Q6 0.0 588 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q8Z1X1 0.0 588 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella typhi
B5RH47 0.0 588 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R1E5 0.0 588 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella enteritidis PT4 (strain P125109)
B1LGP5 0.0 588 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain SMS-3-5 / SECEC)
B5YT08 0.0 588 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XEE5 0.0 588 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O157:H7
B7NDR0 0.0 587 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
A9MN78 0.0 587 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q1R644 0.0 587 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli (strain UTI89 / UPEC)
Q0TCH3 0.0 587 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AGI0 0.0 587 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O1:K1 / APEC
B7MCQ4 0.0 587 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O45:K1 (strain S88 / ExPEC)
Q8FD12 0.0 586 65 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0T014 0.0 583 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Shigella flexneri serotype 5b (strain 8401)
Q7UBD3 0.0 583 64 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Shigella flexneri
Q7MYI0 0.0 579 67 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B2VK95 0.0 575 63 1 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q2NQQ2 0.0 573 65 1 430 3 rsmB Ribosomal RNA small subunit methyltransferase B Sodalis glossinidius (strain morsitans)
Q9KVU5 5.48e-168 481 57 2 424 3 rsmB Ribosomal RNA small subunit methyltransferase B Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8DDE5 1.08e-163 470 54 2 425 3 rsmB Ribosomal RNA small subunit methyltransferase B Vibrio vulnificus (strain CMCP6)
Q87KD3 1.72e-163 469 54 2 423 3 rsmB Ribosomal RNA small subunit methyltransferase B Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q7MGK4 1.16e-162 467 54 2 425 3 rsmB Ribosomal RNA small subunit methyltransferase B Vibrio vulnificus (strain YJ016)
Q9CKP7 2.26e-153 444 55 7 431 3 rsmB Ribosomal RNA small subunit methyltransferase B Pasteurella multocida (strain Pm70)
P44788 2.07e-151 439 52 7 444 3 rsmB Ribosomal RNA small subunit methyltransferase B Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8EKR0 1.14e-140 411 51 6 429 3 rsmB Ribosomal RNA small subunit methyltransferase B Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q7VKC4 1.14e-136 401 50 6 428 3 rsmB Ribosomal RNA small subunit methyltransferase B Haemophilus ducreyi (strain 35000HP / ATCC 700724)
P45679 6.45e-117 351 43 5 432 3 rsmB Probable ribosomal RNA small subunit methyltransferase B Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Q9I7A9 3.89e-116 349 48 3 431 3 rsmB Ribosomal RNA small subunit methyltransferase B Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q88RR3 6.06e-116 348 48 3 417 3 rsmB Ribosomal RNA small subunit methyltransferase B Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q88B41 2.56e-115 347 47 4 416 3 rsmB Ribosomal RNA small subunit methyltransferase B Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q87AR1 2.39e-97 301 40 6 436 3 rsmB Ribosomal RNA small subunit methyltransferase B Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PEV0 3.6e-97 300 41 6 427 3 rsmB Ribosomal RNA small subunit methyltransferase B Xylella fastidiosa (strain 9a5c)
Q8PG22 1.14e-94 294 41 6 431 3 rsmB Ribosomal RNA small subunit methyltransferase B Xanthomonas axonopodis pv. citri (strain 306)
Q8P4G1 2.33e-91 286 41 6 421 3 rsmB Ribosomal RNA small subunit methyltransferase B Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
P72943 1.19e-65 219 36 8 411 3 rsmB Probable ribosomal RNA small subunit methyltransferase B Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P94464 3.06e-55 192 32 14 454 3 rsmB Probable ribosomal RNA small subunit methyltransferase B Bacillus subtilis (strain 168)
P9WGX3 8.64e-30 123 30 15 427 1 Rv1407 Putative methyltransferase Rv1407 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGX2 8.64e-30 123 30 15 427 3 MT1451 Putative methyltransferase MT1451 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q922K7 8.84e-29 122 31 10 346 1 Nop2 28S rRNA (cytosine-C(5))-methyltransferase Mus musculus
P46087 3.69e-28 120 30 12 346 1 NOP2 28S rRNA (cytosine(4447)-C(5))-methyltransferase Homo sapiens
Q5SII2 2.03e-27 117 37 2 182 1 rsmF Ribosomal RNA small subunit methyltransferase F Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P40991 2.75e-25 112 33 7 237 1 NOP2 25S rRNA (cytosine(2870)-C(5))-methyltransferase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O94268 3.99e-25 111 32 7 240 1 nop2 25S rRNA (cytosine-C(5))-methyltransferase nop2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O57712 4.06e-25 109 31 6 220 1 PH1991 tRNA (cytosine(72)-C(5))-methyltransferase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9TYV5 4.52e-25 111 30 10 320 1 nsun-1 26S rRNA (cytosine-C(5))-methyltransferase nsun-1 Caenorhabditis elegans
Q60343 4.14e-24 104 29 7 227 1 trm4 tRNA (cytosine(48)-C(5))-methyltransferase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9FG73 8.57e-24 107 30 5 238 1 NOP2A 25S rRNA (cytosine-C(5))-methyltransferase NOP2A Arabidopsis thaliana
A9MNH4 2.09e-23 105 35 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5BHA6 4.36e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella paratyphi A (strain AKU_12601)
Q5PHN5 4.36e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z662 4.75e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella typhi
A9MV57 4.75e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8ZNZ2 5.21e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5F3P3 5.36e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella agona (strain SL483)
C0Q2Y5 5.41e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella paratyphi C (strain RKS4594)
Q57NF9 5.41e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella choleraesuis (strain SC-B67)
B4TY18 5.52e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella schwarzengrund (strain CVM19633)
B4SV89 5.52e-23 104 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella newport (strain SL254)
Q8VYM6 8.36e-23 104 30 6 239 1 NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B Arabidopsis thaliana
Q7MKY6 1.12e-22 103 32 3 184 3 rsmF Ribosomal RNA small subunit methyltransferase F Vibrio vulnificus (strain YJ016)
Q8D9F3 1.12e-22 103 32 3 184 3 rsmF Ribosomal RNA small subunit methyltransferase F Vibrio vulnificus (strain CMCP6)
B4TKI0 1.18e-22 103 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella heidelberg (strain SL476)
B5R8V2 1.18e-22 103 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R2S1 1.18e-22 103 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella enteritidis PT4 (strain P125109)
B5FTI4 1.18e-22 103 34 8 220 3 rsmF Ribosomal RNA small subunit methyltransferase F Salmonella dublin (strain CT_02021853)
A7N0K6 2.79e-22 102 29 6 227 3 rsmF Ribosomal RNA small subunit methyltransferase F Vibrio campbellii (strain ATCC BAA-1116)
B5FE06 3.26e-22 102 33 5 204 3 rsmF Ribosomal RNA small subunit methyltransferase F Aliivibrio fischeri (strain MJ11)
A7MKH5 4.96e-22 101 34 7 212 3 rsmF Ribosomal RNA small subunit methyltransferase F Cronobacter sakazakii (strain ATCC BAA-894)
Q87PA5 7.82e-22 100 29 5 227 3 rsmF Ribosomal RNA small subunit methyltransferase F Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9V106 1.88e-21 97 34 4 178 1 PYRAB06230 tRNA (cytosine(49)-C(5))-methyltransferase Pyrococcus abyssi (strain GE5 / Orsay)
B6ELC0 2.76e-21 99 31 4 204 3 rsmF Ribosomal RNA small subunit methyltransferase F Aliivibrio salmonicida (strain LFI1238)
B5XQ35 3.88e-21 99 35 7 204 3 rsmF Ribosomal RNA small subunit methyltransferase F Klebsiella pneumoniae (strain 342)
A1S788 3.9e-21 98 30 10 254 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
B7LPL0 3.99e-21 99 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B6IBR3 4.51e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain SE11)
P76273 4.51e-21 98 34 5 202 1 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain K12)
B1XHA3 4.51e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain K12 / DH10B)
C4ZZJ2 4.51e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain K12 / MC4100 / BW2952)
B7M2B1 4.51e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O8 (strain IAI1)
B7L7N7 4.55e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain 55989 / EAEC)
A7ZMV8 4.55e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O139:H28 (strain E24377A / ETEC)
Q3Z2H4 4.72e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Shigella sonnei (strain Ss046)
Q5E5C7 4.78e-21 98 31 4 204 3 rsmF Ribosomal RNA small subunit methyltransferase F Aliivibrio fischeri (strain ATCC 700601 / ES114)
B2VJ83 4.92e-21 98 33 6 209 3 rsmF Ribosomal RNA small subunit methyltransferase F Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q321Y0 4.95e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Shigella boydii serotype 4 (strain Sb227)
B2U477 4.95e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B7MVW5 4.99e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O81 (strain ED1a)
Q8FGS9 5.59e-21 98 34 7 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7USL2 5.85e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A8GDM6 6.27e-21 98 32 4 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Serratia proteamaculans (strain 568)
Q3IHA0 6.29e-21 98 32 6 194 3 rsmF Ribosomal RNA small subunit methyltransferase F Pseudoalteromonas translucida (strain TAC 125)
B1LD37 6.3e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain SMS-3-5 / SECEC)
B7NS84 6.3e-21 98 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O7:K1 (strain IAI39 / ExPEC)
A6TB06 7.04e-21 98 34 7 204 3 rsmF Ribosomal RNA small subunit methyltransferase F Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B7NBI3 8.03e-21 97 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1J0Q3 1.09e-20 97 34 6 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A133 1.09e-20 97 34 6 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O9:H4 (strain HS)
B7VNJ8 1.76e-20 96 29 5 228 3 rsmF Ribosomal RNA small subunit methyltransferase F Vibrio atlanticus (strain LGP32)
Q5SK01 1.87e-20 95 28 11 341 1 rsmB Ribosomal RNA small subunit methyltransferase B Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q0TGZ7 1.94e-20 96 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A4WBJ4 2.75e-20 96 33 8 218 3 rsmF Ribosomal RNA small subunit methyltransferase F Enterobacter sp. (strain 638)
A4SMI9 4.01e-20 95 34 4 191 3 rsmF Ribosomal RNA small subunit methyltransferase F Aeromonas salmonicida (strain A449)
Q83RJ3 4.95e-20 95 32 3 201 5 rsmF Putative ribosomal RNA small subunit methyltransferase F Shigella flexneri
Q0T529 4.95e-20 95 32 3 201 3 rsmF Ribosomal RNA small subunit methyltransferase F Shigella flexneri serotype 5b (strain 8401)
A8AFL6 5.04e-20 95 33 7 203 3 rsmF Ribosomal RNA small subunit methyltransferase F Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A3QDA2 5.67e-20 95 30 4 192 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella loihica (strain ATCC BAA-1088 / PV-4)
B5YQX9 6.36e-20 95 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XCL9 6.36e-20 95 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O157:H7
Q32F19 9.12e-20 94 34 5 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Shigella dysenteriae serotype 1 (strain Sd197)
C6DFU6 1.01e-19 94 33 5 194 3 rsmF Ribosomal RNA small subunit methyltransferase F Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q1RAV2 1.33e-19 94 34 7 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli (strain UTI89 / UPEC)
A1AC00 1.33e-19 94 34 7 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O1:K1 / APEC
B7MBP2 1.33e-19 94 34 7 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Escherichia coli O45:K1 (strain S88 / ExPEC)
Q7TS68 1.52e-19 94 34 3 173 2 Nsun6 tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 Mus musculus
Q081I3 3.37e-19 93 31 9 224 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella frigidimarina (strain NCIMB 400)
C3LMI5 4.18e-19 92 30 4 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Vibrio cholerae serotype O1 (strain M66-2)
Q9KRY1 4.18e-19 92 30 4 202 3 rsmF Ribosomal RNA small subunit methyltransferase F Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A0KKI5 9.14e-19 91 34 4 191 3 rsmF Ribosomal RNA small subunit methyltransferase F Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
Q0HJM6 2.11e-18 90 30 7 219 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella sp. (strain MR-4)
Q6LQU5 2.16e-18 90 34 7 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Photobacterium profundum (strain SS9)
A0KW34 3.32e-18 90 30 7 219 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella sp. (strain ANA-3)
Q0HVX2 3.91e-18 89 30 7 219 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella sp. (strain MR-7)
A1RIZ0 6.63e-18 89 31 6 196 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella sp. (strain W3-18-1)
A4Y7J8 6.63e-18 89 31 6 196 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Q8EDY2 1.27e-17 88 31 10 222 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q8TEA1 1.5e-17 87 35 5 162 1 NSUN6 tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 Homo sapiens
A8H3W2 1.73e-17 87 29 4 200 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
A3D5D5 2.06e-17 87 31 7 196 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella baltica (strain OS155 / ATCC BAA-1091)
A9L4E6 2.15e-17 87 31 7 196 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella baltica (strain OS195)
A6WP46 2.94e-17 87 31 7 194 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella baltica (strain OS185)
B8E968 3.1e-17 87 31 9 198 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella baltica (strain OS223)
Q6D4C8 3.19e-17 87 31 5 193 3 rsmF Ribosomal RNA small subunit methyltransferase F Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q9H649 7.91e-17 84 33 4 176 1 NSUN3 tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial Homo sapiens
A1SWV0 1.39e-16 85 27 6 232 3 rsmF Ribosomal RNA small subunit methyltransferase F Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37)
B8CPH7 2.76e-16 84 28 4 193 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella piezotolerans (strain WP3 / JCM 13877)
B1KQN1 5.52e-16 83 30 7 205 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella woodyi (strain ATCC 51908 / MS32)
Q66KI9 1.09e-15 82 35 4 154 2 nsun4 5-methylcytosine rRNA methyltransferase NSUN4 Xenopus tropicalis
Q12MJ8 1.32e-15 82 27 4 193 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Q0P5D8 1.84e-15 80 33 5 176 2 NSUN3 tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial Bos taurus
A8FWM8 2.25e-15 81 31 8 198 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella sediminis (strain HAW-EB3)
Q4KMK0 2.43e-15 80 26 13 356 2 nsun3 tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial Danio rerio
Q9W4M9 2.68e-15 81 32 5 176 2 Nsun2 tRNA (cytosine(34)-C(5))-methyltransferase Drosophila melanogaster
B0TIZ6 4.4e-15 80 27 7 229 3 rsmF Ribosomal RNA small subunit methyltransferase F Shewanella halifaxensis (strain HAW-EB4)
Q5ZLV4 8.27e-15 80 33 5 166 2 NSUN2 RNA cytosine-C(5)-methyltransferase NSUN2 Gallus gallus
Q8CCT7 1.21e-14 78 31 5 180 2 Nsun3 tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial Mus musculus
Q5M7E3 3.5e-14 77 31 5 181 2 nsun4 5-methylcytosine rRNA methyltransferase NSUN4 Xenopus laevis
Q1HFZ0 3.51e-14 78 33 5 166 1 Nsun2 RNA cytosine C(5)-methyltransferase NSUN2 Mus musculus
Q08J23 6.41e-14 77 32 5 181 1 NSUN2 RNA cytosine C(5)-methyltransferase NSUN2 Homo sapiens
Q4V7N2 2.19e-13 75 33 5 161 2 nsun2 RNA cytosine-C(5)-methyltransferase NSUN2 Xenopus laevis
Q0V8R7 4.01e-13 73 33 4 158 2 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 Bos taurus
Q28E61 5.28e-13 74 33 5 161 2 nsun2 RNA cytosine-C(5)-methyltransferase NSUN2 Xenopus tropicalis
P38205 1.17e-12 73 32 5 175 1 NCL1 Multisite-specific tRNA:(cytosine-C(5))-methyltransferase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9HGQ2 1.49e-12 73 32 5 175 1 trm4a Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9CZ57 1.51e-12 72 32 4 159 1 Nsun4 5-methylcytosine rRNA methyltransferase NSUN4 Mus musculus
Q96CB9 1.14e-11 69 32 4 158 1 NSUN4 5-methylcytosine rRNA methyltransferase NSUN4 Homo sapiens
Q95XR2 1.8e-11 69 26 8 266 1 nsun-4 5-methylcytosine rRNA methyltransferase nsun-4 Caenorhabditis elegans
O13935 9.92e-11 67 30 3 178 1 trm4b Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9NAA7 3.49e-10 65 30 8 198 1 nsun-5 26S rRNA (cytosine-C(5))-methyltransferase nsun-5 Caenorhabditis elegans
Q96P11 6.56e-10 64 27 9 265 1 NSUN5 28S rRNA (cytosine-C(5))-methyltransferase Homo sapiens
Q9VDZ4 1.12e-09 63 28 7 221 2 Nsun5 28S rRNA (cytosine-C(5))-methyltransferase Drosophila melanogaster
O14039 4.81e-09 61 26 11 251 3 rcm1 25S rRNA (cytosine-C(5))-methyltransferase rcm1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8K4F6 7.98e-09 61 30 9 204 1 Nsun5 28S rRNA (cytosine-C(5))-methyltransferase Mus musculus
Q8GYE8 4.91e-07 55 27 6 184 1 NSUN5 25S rRNA (cytosine-C(5))-methyltransferase NSUN5 Arabidopsis thaliana
Q84MA1 3.26e-06 53 34 2 105 2 NOP2C rRNA (cytosine-C(5))-methyltransferase NOP2C Arabidopsis thaliana
P53972 2.88e-05 50 21 11 295 1 RCM1 25S rRNA (cytosine(2278)-C(5))-methyltransferase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19075
Feature type CDS
Gene rsmB
Product 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
Location 23366 - 24649 (strand: -1)
Length 1284 (nucleotides) / 427 (amino acids)

Contig

Accession term accessions NZ_VXKB01000011 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 30728 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2368
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01029 NusB family
PF01189 16S rRNA methyltransferase RsmB/F
PF22458 Methyltr_RsmF/B-like, ferredoxin-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0144 Translation, ribosomal structure and biogenesis (J) J 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] - -

Protein Sequence

MKNSYNLRSIAAKAISQVLDQGQSLSAILPDYQRDINPKDKALLQELCFGVMRVLPELEWYSQQLMAKPLTGKQRVLHYLILTGLYQLRYTRIPPHAALSETVNGAVVLKKPQLKGLINGVLRQFQRQEPQLAERFANSESRWLHPKWLLSRIQAAYPDRWELVITANNEKPPMWLRINRNHHSAPAYQALLAEAGIDAFYNPAFPDALRLAIPCPVTDLPGFAEGWATVQDSSAQGCALLLDPQDNETVLDLCAAPGGKTTHILEIAPHAHVMAVDVDKQRLTRVNENLQRLKQHAIIKTGDGRYPEQWAESQMFDRILLDAPCSATGVIRRHPDIKWLRRDSDIDELAALQREILDAIWPYLKPGGTLVYATCSVLPEENIHQVNHFLSVHSDAILTDTPVSGYQMLPDAQSGDGFFYAKLTKRS

Flanking regions ( +/- flanking 50bp)

TGCCGGCCACGCCTTCTCTTCATCATTATCGCCGGCGCACCGGAACAACAATGAAAAACAGTTATAACTTACGCAGTATTGCAGCCAAAGCCATCAGCCAGGTATTGGATCAGGGACAATCTCTCAGTGCTATCCTGCCTGACTATCAGCGGGATATTAATCCGAAAGATAAAGCACTCCTTCAGGAGTTATGCTTTGGCGTGATGAGGGTTCTGCCTGAGCTGGAGTGGTATTCTCAGCAATTAATGGCAAAACCCCTGACCGGAAAGCAGCGCGTGCTGCACTATCTGATTTTAACCGGGCTTTATCAGCTCCGTTATACCCGAATTCCGCCTCATGCGGCATTATCAGAGACAGTAAACGGCGCAGTGGTACTGAAAAAACCACAGTTAAAAGGACTGATTAACGGCGTATTGCGCCAGTTTCAGCGCCAGGAGCCGCAACTTGCTGAGCGTTTTGCCAATTCAGAAAGCCGCTGGCTGCATCCGAAATGGTTACTCTCCCGTATTCAGGCTGCTTACCCTGATAGATGGGAGTTGGTCATAACCGCGAACAATGAAAAGCCACCGATGTGGCTGCGAATTAACCGTAATCATCATTCTGCACCAGCCTACCAGGCATTACTGGCAGAAGCCGGAATTGACGCCTTTTATAACCCTGCATTCCCGGATGCACTTCGCCTGGCAATACCTTGTCCGGTCACTGACCTGCCGGGATTTGCTGAAGGCTGGGCGACAGTCCAGGACAGCTCGGCACAGGGCTGCGCCCTTCTGTTAGATCCGCAGGATAATGAAACTGTTTTAGATTTATGTGCAGCGCCCGGCGGGAAAACCACGCATATTTTAGAGATAGCTCCCCACGCACACGTAATGGCTGTTGATGTGGATAAACAACGTCTGACGCGGGTGAATGAAAATTTACAGCGGCTGAAACAGCACGCCATCATCAAAACCGGTGACGGACGTTATCCGGAGCAATGGGCAGAATCACAAATGTTTGATCGTATCCTGCTGGATGCCCCTTGCTCCGCGACAGGGGTTATAAGACGGCATCCTGATATTAAATGGCTGCGCCGTGACAGTGATATCGATGAGCTGGCAGCACTACAGCGGGAAATTCTCGACGCAATCTGGCCATATCTCAAACCCGGCGGAACACTGGTGTATGCGACCTGCTCCGTATTACCGGAAGAAAATATTCATCAGGTAAATCATTTCCTGTCTGTTCACAGTGATGCGATATTAACTGACACGCCGGTATCCGGTTATCAGATGCTGCCGGATGCACAGAGCGGAGACGGGTTCTTTTACGCTAAACTGACTAAACGTAGCTGATAAACAAAACCGGACGATCATTTATATGAAAATTATTATTCTCGGTGCCG