Homologs in group_1331

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08235 FBDBKF_08235 96.0 Morganella morganii S1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
EHELCC_13290 EHELCC_13290 96.0 Morganella morganii S2 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
NLDBIP_13630 NLDBIP_13630 96.0 Morganella morganii S4 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
LHKJJB_12925 LHKJJB_12925 96.0 Morganella morganii S3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
HKOGLL_12105 HKOGLL_12105 96.0 Morganella morganii S5 wecC UDP-N-acetyl-D-mannosamine dehydrogenase
PMI_RS16495 PMI_RS16495 83.6 Proteus mirabilis HI4320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase

Distribution of the homologs in the orthogroup group_1331

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1331

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P67067 0.0 706 79 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Shigella flexneri
P27829 0.0 706 79 0 420 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli (strain K12)
P67066 0.0 706 79 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli O157:H7
Q8ZAE4 0.0 705 80 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Yersinia pestis
Q8Z389 0.0 679 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhi
Q9L6R4 0.0 672 78 0 420 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P58591 0.0 559 61 2 419 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
Q45410 0.0 554 61 2 419 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia solanacearum
Q57871 1.6e-112 339 43 7 424 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A6VK13 4.17e-110 333 42 8 429 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Q6LZC3 2.92e-108 328 42 7 428 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
A4FY94 9.21e-108 327 41 9 432 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
A6USK4 1.27e-105 322 39 7 427 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
A6UU98 1.72e-99 306 41 8 409 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
O59284 6.35e-91 283 38 9 422 1 PH1618 UDP-N-acetyl-D-mannosamine dehydrogenase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
G3XD94 7e-56 193 30 11 426 1 wbpA UDP-N-acetyl-D-glucosamine 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q04972 8.28e-41 153 29 14 413 3 vipA Vi polysaccharide biosynthesis protein VipA/TviB Salmonella typhi
O54068 7.38e-40 150 28 14 436 1 rkpK UDP-glucose 6-dehydrogenase Rhizobium meliloti (strain 1021)
P39861 3.64e-39 148 28 10 401 3 capL Protein CapL Staphylococcus aureus
P96718 1.81e-37 144 28 13 413 1 ywqF UDP-glucose 6-dehydrogenase YwqF Bacillus subtilis (strain 168)
O86422 1.47e-33 134 27 14 422 3 udg UDP-glucose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O32271 1.39e-32 131 28 17 439 1 tuaD UDP-glucose 6-dehydrogenase TuaD Bacillus subtilis (strain 168)
Q92GB1 2.17e-31 127 27 11 418 3 udg UDP-glucose 6-dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
D4GYH5 2.92e-29 121 30 12 366 1 aglM UDP-glucose 6-dehydrogenase AglM Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Q4UK39 5.74e-29 120 26 12 415 3 udg UDP-glucose 6-dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RKF8 1.71e-27 116 26 9 356 3 udg UDP-glucose 6-dehydrogenase Rickettsia bellii (strain RML369-C)
Q19905 2.69e-27 116 29 12 394 1 sqv-4 UDP-glucose 6-dehydrogenase Caenorhabditis elegans
O05973 1.05e-26 114 25 15 436 3 udg UDP-glucose 6-dehydrogenase Rickettsia prowazekii (strain Madrid E)
Q58454 1.05e-25 113 28 6 285 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O34862 1.09e-25 111 25 11 409 3 ytcA Putative UDP-glucose 6-dehydrogenase YtcA Bacillus subtilis (strain 168)
Q68VX0 1.37e-25 111 25 15 436 3 udg UDP-glucose 6-dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P51585 2.09e-25 110 25 9 439 3 algD GDP-mannose 6-dehydrogenase Azotobacter vinelandii
Q2QS13 6.93e-25 109 29 12 363 2 UGD5 UDP-glucose 6-dehydrogenase 5 Oryza sativa subsp. japonica
Q887P8 3.01e-24 107 26 12 449 2 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q2QS14 3.12e-24 107 29 13 363 2 UGD4 UDP-glucose 6-dehydrogenase 4 Oryza sativa subsp. japonica
P59793 3.58e-24 107 25 9 445 3 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. syringae
O07299 3.72e-24 107 25 10 445 3 algD GDP-mannose 6-dehydrogenase Pseudomonas savastanoi pv. phaseolicola
Q9AUV6 4.35e-24 107 28 11 363 2 UGD3 UDP-glucose 6-dehydrogenase 3 Oryza sativa subsp. japonica
Q88NC4 1.1e-22 102 25 10 438 3 algD GDP-mannose 6-dehydrogenase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P11759 1.73e-22 102 24 13 438 1 algD GDP-mannose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9FZE1 9.91e-22 100 27 13 384 1 UGD1 UDP-glucose 6-dehydrogenase 1 Arabidopsis thaliana
O02373 1.02e-21 100 25 15 456 1 sgl UDP-glucose 6-dehydrogenase Drosophila melanogaster
B7F958 2.66e-21 99 27 11 365 2 UGD2 UDP-glucose 6-dehydrogenase 2 Oryza sativa subsp. japonica
Q75GS4 7.31e-21 97 27 12 366 3 UGD1 UDP-glucose 6-dehydrogenase 1 Oryza sativa subsp. japonica
Q96558 7.34e-21 97 26 11 365 2 UGD1 UDP-glucose 6-dehydrogenase 1 Glycine max
Q9FM01 4.34e-20 95 26 11 365 1 UGD4 UDP-glucose 6-dehydrogenase 4 Arabidopsis thaliana
Q9LIA8 4.5e-20 95 26 11 384 1 UGD2 UDP-glucose 6-dehydrogenase 2 Arabidopsis thaliana
Q9LF33 6e-20 95 26 11 365 1 UGD3 UDP-glucose 6-dehydrogenase 3 Arabidopsis thaliana
P12378 1.12e-18 91 25 12 375 1 UGDH UDP-glucose 6-dehydrogenase Bos taurus
Q5R7B3 2.66e-18 90 25 12 375 2 UGDH UDP-glucose 6-dehydrogenase Pongo abelii
O70199 2.72e-18 90 25 12 375 1 Ugdh UDP-glucose 6-dehydrogenase Rattus norvegicus
Q5F3T9 3.19e-18 90 25 12 375 2 UGDH UDP-glucose 6-dehydrogenase Gallus gallus
O60701 3.47e-18 90 25 12 375 1 UGDH UDP-glucose 6-dehydrogenase Homo sapiens
O70475 1.76e-17 87 25 12 375 1 Ugdh UDP-glucose 6-dehydrogenase Mus musculus
O33952 1.14e-14 78 24 10 289 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli
Q47329 1.62e-14 78 22 10 368 3 kfiD UDP-glucose 6-dehydrogenase Escherichia coli
Q04873 1.76e-13 75 26 10 288 3 udg UDP-glucose 6-dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q0P8H3 1.38e-11 69 21 14 387 1 kfiD UDP-glucose 6-dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q04872 4.67e-11 67 24 10 290 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O111:H-
Q7DBF9 5.25e-10 64 24 9 286 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O157:H7
P37791 1.8e-09 62 23 9 286 5 udg Putative UDP-glucose 6-dehydrogenase Shigella flexneri
Q8FG45 2.22e-09 62 23 9 286 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P76373 4.05e-09 61 23 9 286 1 ugd UDP-glucose 6-dehydrogenase Escherichia coli (strain K12)
Q57346 2.37e-06 53 23 11 284 3 cap3A UDP-glucose 6-dehydrogenase Streptococcus pneumoniae

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18785
Feature type CDS
Gene wecC
Product UDP-N-acetyl-D-mannosamine dehydrogenase
Location 26296 - 27558 (strand: 1)
Length 1263 (nucleotides) / 420 (amino acids)

Contig

Accession term accessions NZ_VXKB01000010 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 36620 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1331
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain
PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0677 Cell wall/membrane/envelope biogenesis (M) M UDP-N-acetyl-D-mannosaminuronate dehydrogenase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG007635 UDP-N-acetyl-D-mannosamine dehydrogenase VF0624 Immune modulation

Protein Sequence

MSFETISVVGLGYIGLPTAAAFASRQKKVVGVDVNQHAVDTINRGEIHIVEPDLGAVVKTAVDGGFLKAFTKPQPADAFLIAVPTPFKGDHEPDLVFVQSAAESIAPVLKKGDLVILESTSPVGATEQMAEWLAVARPDLTFPQQAGEDADIDIAYCPERVLPGQVMVELIKNDRVVGGMTAKSSKRASELYYIFLEGECVITNARTAEMCKLTENSFRDVNIAFANELSLICADQGINVWELISLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPKQARLIHTARLVNDGKPLWVIDQVKAAVADCLTETGKRAGEVTIACFGLAFKPNIDDLRESPAVHVTKMVAEWHAGKTLAVEPNVHELPNKLKGLAELTSIDKAIADADIILLLVDHTPFKNIPGSQIPQKWIIDTKGVWR

Flanking regions ( +/- flanking 50bp)

AAAGCGTGCCAGCGTATTCTTGAAGCATTGAAAAACAATCAGGTGACATTATGAGTTTTGAAACTATTTCTGTTGTCGGTCTGGGTTACATCGGTTTGCCAACAGCGGCAGCATTTGCTTCCCGTCAGAAAAAAGTGGTTGGTGTGGATGTGAACCAGCATGCGGTTGATACCATTAATCGTGGTGAAATTCATATCGTGGAGCCGGATTTAGGCGCGGTCGTGAAAACAGCCGTTGATGGCGGTTTCCTGAAAGCCTTTACCAAACCACAACCTGCGGATGCGTTCCTGATTGCAGTGCCGACCCCGTTTAAAGGGGATCATGAGCCGGATCTGGTTTTTGTTCAGTCAGCGGCAGAATCTATTGCGCCGGTACTGAAAAAAGGGGATTTGGTTATCCTTGAATCCACCTCTCCGGTTGGTGCGACTGAGCAGATGGCAGAATGGCTGGCGGTTGCCCGCCCGGATCTGACGTTCCCGCAGCAGGCGGGTGAAGACGCGGATATTGATATTGCTTACTGCCCTGAGCGTGTGTTGCCGGGTCAGGTAATGGTTGAACTGATTAAAAATGACCGTGTTGTCGGCGGCATGACAGCAAAATCGTCAAAACGCGCCAGCGAACTGTATTACATCTTCCTGGAAGGGGAGTGTGTAATCACTAACGCACGCACGGCTGAAATGTGCAAACTGACTGAAAACAGCTTCCGTGATGTCAATATTGCATTTGCCAATGAATTATCACTGATTTGTGCCGATCAGGGCATCAACGTCTGGGAACTGATCAGCCTGGCAAACCGCCATCCGCGCGTGAATATCTTACAGCCGGGTCCGGGTGTGGGCGGACACTGTATCGCCGTTGACCCGTGGTTTATCGTGGCGCAGAACCCGAAACAGGCGCGTCTGATCCATACCGCACGTCTGGTTAACGATGGCAAACCACTGTGGGTTATCGACCAGGTGAAAGCTGCCGTTGCGGATTGCCTGACAGAAACCGGCAAACGTGCGGGTGAAGTGACCATTGCCTGCTTTGGTCTGGCATTTAAACCAAATATTGATGATTTACGTGAAAGCCCGGCCGTTCATGTTACTAAAATGGTGGCAGAGTGGCATGCAGGGAAAACCCTGGCGGTCGAACCGAATGTTCACGAACTGCCTAATAAGCTGAAAGGGCTGGCTGAGCTGACATCAATCGACAAAGCGATTGCTGACGCTGATATTATCCTGCTGCTCGTTGACCACACACCGTTTAAAAATATTCCGGGCAGCCAGATCCCGCAGAAATGGATCATCGACACCAAAGGAGTATGGCGTTGAAACGCATTTTAGTGACAGGCGGAGCCGGTTTTATCGGCTCTGCTGTTGTT