Homologs in group_1319

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08165 FBDBKF_08165 87.0 Morganella morganii S1 ilvM acetolactate synthase 2 small subunit
EHELCC_13365 EHELCC_13365 87.0 Morganella morganii S2 ilvM acetolactate synthase 2 small subunit
NLDBIP_13700 NLDBIP_13700 87.0 Morganella morganii S4 ilvM acetolactate synthase 2 small subunit
LHKJJB_12855 LHKJJB_12855 87.0 Morganella morganii S3 ilvM acetolactate synthase 2 small subunit
HKOGLL_12175 HKOGLL_12175 87.0 Morganella morganii S5 ilvM acetolactate synthase 2 small subunit
PMI_RS16405 PMI_RS16405 53.9 Proteus mirabilis HI4320 ilvM acetolactate synthase 2 small subunit

Distribution of the homologs in the orthogroup group_1319

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1319

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADG3 2.38e-25 93 54 1 86 3 ilvM Acetolactate synthase isozyme 2 small subunit Shigella flexneri
P0ADG1 2.38e-25 93 54 1 86 1 ilvM Acetolactate synthase isozyme 2 small subunit Escherichia coli (strain K12)
P0ADG2 2.38e-25 93 54 1 86 3 ilvM Acetolactate synthase isozyme 2 small subunit Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O05031 4.4e-05 43 42 1 57 5 HI_0737 Putative uncharacterized protein HI_0737 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18695
Feature type CDS
Gene ilvM
Product acetolactate synthase 2 small subunit
Location 5959 - 6237 (strand: 1)
Length 279 (nucleotides) / 92 (amino acids)

Contig

Accession term accessions NZ_VXKB01000010 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 36620 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1319
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13710 ACT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3978 Amino acid transport and metabolism (E) E Acetolactate synthase small subunit, contains ACT domain

Kegg Ortholog Annotation(s)

Protein Sequence

MMMHQLAIQARSCPEILERVLRVVRHRGFNICAMKMDLAKGSEGDNVNIELTISSLRPLALLCTQLVKLADVADVEICTQKRENYQHISRAI

Flanking regions ( +/- flanking 50bp)

CCATTAGTGCCTCCGGGCGCGGGTAATGAACAAATGATGGAGAGCACATTATGATGATGCACCAGTTAGCTATTCAGGCGCGTTCCTGCCCGGAAATCCTGGAGCGTGTTCTGCGCGTTGTTCGTCACCGGGGGTTTAACATTTGCGCGATGAAAATGGATCTGGCGAAAGGTTCTGAAGGTGATAATGTAAACATTGAGTTAACAATTTCAAGCCTGCGACCGCTGGCCTTACTCTGTACGCAGTTAGTTAAGTTAGCGGATGTGGCGGATGTCGAAATCTGTACACAAAAAAGAGAAAATTATCAGCACATTAGCCGTGCGATCTAAGGAAAATAACAATGACAAAAAAAGCTGATTTTATTTGGTTCAATGATGAG