Homologs in group_477

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19495 FBDBKF_19495 81.2 Morganella morganii S1 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
EHELCC_16440 EHELCC_16440 81.2 Morganella morganii S2 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
NLDBIP_16650 NLDBIP_16650 81.2 Morganella morganii S4 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
LHKJJB_16820 LHKJJB_16820 81.2 Morganella morganii S3 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
HKOGLL_18795 HKOGLL_18795 81.2 Morganella morganii S5 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
PMI_RS13610 PMI_RS13610 76.5 Proteus mirabilis HI4320 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase

Distribution of the homologs in the orthogroup group_477

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_477

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P38448 8.85e-121 344 78 0 213 3 eda KHG/KDPG aldolase Dickeya dadantii (strain 3937)
P0A958 1.77e-111 320 77 0 211 3 eda KHG/KDPG aldolase Shigella flexneri
P0A955 1.77e-111 320 77 0 211 1 eda KHG/KDPG aldolase Escherichia coli (strain K12)
P0A956 1.77e-111 320 77 0 211 3 eda KHG/KDPG aldolase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A957 1.77e-111 320 77 0 211 3 eda KHG/KDPG aldolase Escherichia coli O157:H7
Q15X88 6.86e-94 276 63 0 210 1 Patl_0974 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
P00885 2.59e-66 206 49 0 201 1 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas putida
Q00384 1.11e-63 199 51 2 201 1 eda KHG/KDPG aldolase Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
O68283 1.71e-63 199 45 0 200 3 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O83578 4.08e-51 167 44 0 190 3 eda Putative KHG/KDPG aldolase Treponema pallidum (strain Nichols)
P44480 1.48e-43 148 36 0 192 1 eda Putative KHG/KDPG aldolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P50846 7.84e-22 91 33 2 162 2 kdgA KHG/KDPG aldolase Bacillus subtilis (strain 168)
Q92RN8 5.34e-10 60 28 4 175 3 dgoA Probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Rhizobium meliloti (strain 1021)
Q6BF16 1.69e-08 55 28 3 142 1 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18630
Feature type CDS
Gene -
Product bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
Location 72463 - 73104 (strand: 1)
Length 642 (nucleotides) / 213 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000009
Length 74461 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_477
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01081 KDPG and KHG aldolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0800 Carbohydrate transport and metabolism (G) G 2-keto-3-deoxy-6-phosphogluconate aldolase

Kegg Ortholog Annotation(s)

Protein Sequence

MNNWKISANSILTAGPVVPVIVIDELHQAVPLARALIAGGVRVLEVTLRTSCAIDAIRTIAQEVPEAIVGAGTVTNSEQLKAVTEAGAQFAISPGLTDALLQAAVDGPIPLIPGISTVSELMTGMNYGLDNFKFFPAEANGGVSALKAIAGPFSHIRFCPTGGISLSNYRDYLALNSVLCVGGSWLVPADAIRDGDYARITTLAAQAVAGATA

Flanking regions ( +/- flanking 50bp)

TATCCGTTTCTGAACCTTTTTTAGATTTGATGATAAAAGTGAGAGTAATAATGAATAACTGGAAAATAAGTGCAAATTCAATCTTAACAGCAGGACCCGTTGTGCCTGTTATTGTGATCGATGAACTGCACCAGGCTGTGCCGCTGGCCCGCGCGCTGATCGCCGGGGGAGTGCGTGTCCTTGAAGTGACATTACGCACCAGTTGCGCCATTGATGCAATACGCACTATAGCACAGGAAGTGCCTGAAGCGATTGTCGGCGCAGGTACAGTGACTAATTCGGAACAATTAAAAGCGGTTACAGAAGCGGGTGCGCAGTTTGCTATCAGTCCGGGCCTGACGGATGCCCTGCTGCAAGCGGCTGTGGACGGACCGATTCCGCTGATCCCGGGAATTTCAACAGTATCCGAATTAATGACAGGCATGAATTACGGACTGGATAACTTTAAATTTTTCCCGGCAGAGGCTAACGGCGGCGTCAGCGCCCTGAAAGCAATCGCAGGTCCGTTTTCGCATATCCGGTTCTGCCCGACAGGCGGAATAAGTCTGAGTAACTATCGTGATTATCTCGCACTCAACAGTGTGCTGTGTGTCGGTGGATCCTGGCTGGTGCCTGCGGATGCTATCCGTGATGGTGACTATGCGCGTATTACAACTCTGGCTGCACAAGCCGTTGCCGGTGCAACAGCCTGATTATTCAGACTCGATCTGTTTTTGCCACCGCAATGGTGGCATTTTCAGTT