Homologs in group_2218

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16950 FBDBKF_16950 82.1 Morganella morganii S1 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
EHELCC_16640 EHELCC_16640 82.1 Morganella morganii S2 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
NLDBIP_16850 NLDBIP_16850 82.1 Morganella morganii S4 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
LHKJJB_16620 LHKJJB_16620 82.1 Morganella morganii S3 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
HKOGLL_17585 HKOGLL_17585 82.1 Morganella morganii S5 dedA Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family
PMI_RS17565 PMI_RS17565 77.3 Proteus mirabilis HI4320 - DedA family protein

Distribution of the homologs in the orthogroup group_2218

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2218

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P57239 5.3e-28 108 31 0 155 3 BU139 Uncharacterized membrane protein BU139 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P30149 4.79e-26 102 32 0 156 1 yabI Inner membrane protein YabI Escherichia coli (strain K12)
Q89AV4 1.76e-24 99 31 0 154 3 bbp_130 Uncharacterized membrane protein bbp_130 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8KA02 2.24e-23 95 29 0 148 3 BUsg_132 Uncharacterized membrane protein BUsg_132 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q2FVB8 8.53e-12 64 28 6 185 3 uptA Undecaprenyl phosphate transporter A Staphylococcus aureus (strain NCTC 8325 / PS 47)
P0AA66 1.13e-11 63 28 1 142 3 yqjA Inner membrane protein YqjA Shigella flexneri
P0AA63 1.13e-11 63 28 1 142 1 yqjA Inner membrane protein YqjA Escherichia coli (strain K12)
P0AA64 1.13e-11 63 28 1 142 3 yqjA Inner membrane protein YqjA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA65 1.13e-11 63 28 1 142 3 yqjA Inner membrane protein YqjA Escherichia coli O157:H7
P0AA60 3.44e-10 60 26 2 162 1 yghB Inner membrane protein YghB Escherichia coli (strain K12)
P0AA61 3.44e-10 60 26 2 162 3 yghB Inner membrane protein YghB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA62 3.44e-10 60 26 2 162 3 yghB Inner membrane protein YghB Escherichia coli O157:H7
P0ABP6 5.11e-09 56 27 3 147 1 dedA Protein DedA Escherichia coli (strain K12)
P0ABP7 5.11e-09 56 27 3 147 3 dedA Protein DedA Escherichia coli O157:H7
P63912 3.34e-08 54 27 3 147 3 BQ2027_MB2670 Uncharacterized membrane protein Mb2670 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WP07 3.34e-08 54 27 3 147 1 Rv2637 Uncharacterized membrane protein Rv2637 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP06 3.34e-08 54 27 3 147 3 MT2715 Uncharacterized membrane protein MT2715 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A0A0H3H138 1.35e-07 52 25 3 148 1 dedA DedA family protein Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
Q49642 5.23e-07 51 31 2 132 3 ML0467 Uncharacterized membrane protein ML0467 Mycobacterium leprae (strain TN)
O69601 7.2e-07 50 28 2 146 3 ML0287 Uncharacterized membrane protein ML0287 Mycobacterium leprae (strain TN)
Q55705 1.39e-06 50 33 3 136 3 slr0232 Uncharacterized membrane protein slr0232 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q57654 0.000153 43 29 3 115 4 MJ0201 Uncharacterized protein MJ0201 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0A1F4 0.000231 43 28 1 89 3 yghB Inner membrane protein YghB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1F5 0.000231 43 28 1 89 3 yghB Inner membrane protein YghB Salmonella typhi
O51266 0.0003 43 34 4 92 1 BB_0250 Inner membrane protein BB_0250 Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q9CHL6 0.000421 42 27 3 137 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. lactis (strain IL1403)
P9WP09 0.000569 42 27 5 152 1 Rv0364 Uncharacterized membrane protein Rv0364 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP08 0.000569 42 27 5 152 3 MT0380 Uncharacterized membrane protein MT0380 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q48630 0.001 42 26 3 137 3 apl Alkaline phosphatase-like protein Lactococcus lactis subsp. cremoris (strain MG1363)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18420
Feature type CDS
Gene -
Product DedA family protein
Location 18176 - 18709 (strand: -1)
Length 534 (nucleotides) / 177 (amino acids)

Contig

Accession term accessions NZ_VXKB01000009 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 74461 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2218
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF09335 VTT domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0586 Cell wall/membrane/envelope biogenesis (M) M Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03975 membrane-associated protein - -

Protein Sequence

MTLTDIITIVTAFVREHEYWALPVIFVLAFGESLAFLSLLFPATVILLGVGALIGEGGLGFWSVWLMAASGAFFGDWISYYVGYYYKDGVRKMWPISRSPQTLVKGHQFFEKWGVWGVFIGRFFGPLRAVIPLVAGICAMPQRYFQIANLLSAMVWAFGLLAPGAFGLHWIAKLMGT

Flanking regions ( +/- flanking 50bp)

AAATCCGCAACCACTTCCTCGAATAATACCCGCAGGGAAAGGGGGTTTTTCTGACACTGACTGACATTATTACTATCGTGACCGCGTTTGTCCGTGAGCACGAGTACTGGGCGTTACCGGTCATTTTTGTGCTGGCGTTCGGTGAATCTCTCGCGTTTCTCTCTCTGCTGTTTCCGGCAACCGTGATCCTGCTGGGGGTCGGCGCACTGATTGGTGAAGGCGGGCTGGGCTTCTGGTCAGTCTGGCTGATGGCGGCCTCCGGTGCGTTTTTCGGCGACTGGATCTCCTATTACGTCGGTTACTATTATAAAGATGGTGTCCGTAAAATGTGGCCGATATCCCGATCCCCGCAAACGCTGGTCAAAGGGCATCAGTTCTTTGAAAAATGGGGTGTATGGGGCGTATTTATCGGACGTTTTTTTGGTCCTCTCCGTGCTGTGATCCCACTGGTGGCGGGGATTTGTGCTATGCCTCAGCGCTATTTTCAGATAGCCAATCTGCTTTCCGCTATGGTCTGGGCGTTCGGATTATTAGCCCCCGGGGCGTTCGGACTGCACTGGATAGCAAAACTGATGGGCACATAATTCTCCGTTTTCATCGGTTTACATCCGTTTTTGCGTGACGCGCCGAAAAA