Homologs in group_2202

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16865 FBDBKF_16865 83.9 Morganella morganii S1 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
EHELCC_19565 EHELCC_19565 83.9 Morganella morganii S2 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
NLDBIP_16935 NLDBIP_16935 83.9 Morganella morganii S4 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
LHKJJB_16535 LHKJJB_16535 83.9 Morganella morganii S3 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
HKOGLL_17500 HKOGLL_17500 83.9 Morganella morganii S5 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase
PMI_RS17660 PMI_RS17660 67.8 Proteus mirabilis HI4320 hemG menaquinone-dependent protoporphyrinogen IX dehydrogenase

Distribution of the homologs in the orthogroup group_2202

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2202

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9L6L1 2.17e-67 206 52 0 174 3 hemG Protoporphyrinogen IX dehydrogenase [quinone] Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0ACB4 5.63e-67 205 53 0 174 1 hemG Protoporphyrinogen IX dehydrogenase [quinone] Escherichia coli (strain K12)
P0ACB5 5.63e-67 205 53 0 174 3 hemG Protoporphyrinogen IX dehydrogenase [quinone] Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACB6 5.63e-67 205 53 0 174 3 hemG Protoporphyrinogen IX dehydrogenase [quinone] Escherichia coli O157:H7
Q4QIU7 5.02e-60 189 52 1 172 1 hemG Protoporphyrinogen IX dehydrogenase [quinone] Leishmania major

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18335
Feature type CDS
Gene hemG
Product menaquinone-dependent protoporphyrinogen IX dehydrogenase
Location 298 - 822 (strand: -1)
Length 525 (nucleotides) / 174 (amino acids)

Contig

Accession term accessions NZ_VXKB01000009 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 74461 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2202
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12724 Flavodoxin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4635 Coenzyme transport and metabolism (H) H Protoporphyrinogen IX oxidase, menaquinone-dependent (flavodoxin domain)

Kegg Ortholog Annotation(s)

Protein Sequence

MSYLLLYSSHDGQTKKIVTQIALHLRKAGMQCDVRSLQEGHALNLAPYEKILVGASIRYGHFNRALNRFANLHAAQMNQMKTAFFGVNLTARKPEKRTPQTNLYVRKFLEATPWKPTVSAVFAGALLYPRYRWLDRVMIRLIMKMTKGETDTTKEIEYTDWDQVEAFATEFAHI

Flanking regions ( +/- flanking 50bp)

TACTTGTTTTGCTGACGCCAACCTTCTGGCGTGATTAACGGAGTTTTTCCATGTCGTATTTGTTGCTTTACTCCAGTCATGACGGACAAACTAAAAAAATTGTCACACAGATTGCCTTACATCTGCGTAAGGCCGGAATGCAGTGCGATGTCCGCTCCTTACAGGAAGGACATGCACTGAATTTGGCACCCTATGAAAAGATACTGGTTGGTGCATCTATCCGTTACGGACATTTTAATCGTGCTCTGAACCGGTTTGCGAATTTGCATGCTGCGCAAATGAATCAGATGAAAACAGCATTCTTCGGCGTAAATCTGACAGCGCGTAAACCTGAAAAACGAACACCACAGACAAACCTGTATGTTCGCAAGTTCCTGGAAGCGACTCCATGGAAGCCGACAGTCAGTGCTGTATTTGCCGGAGCACTGCTGTACCCCCGTTATCGCTGGCTAGATCGCGTAATGATCCGTCTTATAATGAAGATGACAAAAGGGGAAACGGATACTACAAAAGAAATCGAGTATACAGATTGGGATCAGGTTGAGGCCTTTGCAACTGAGTTTGCTCATATTTAAACCAGAACCCGGTATTTTTGCCCGGAATACAACCGGATTGGGTGATTTCT